Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1494 ATGGGTATGTTTGACATGTCAGGAAATTCAGTTTTACCACTGGATTGTGAAAATAATGATCTAAATGGGTTGTTAGCTTCCATTTCTTCTGCAAGTGCCAACAATCCCTTCCCTTCCCAATATAAGGCTTATGAAGAAGCAATGGCTTCATTGCAAAGAGATTCTTTTTGTCTTGGTGACCTATTGAAAGGAACCATGGAAGCTCAAGTTGTATTATCAGATAGGGATAGTGCTGATGTGCTTTTGAAGCCTAACTCTTCCATGAACAGCTTAATTGCCAAAAACTCCTGTTTTGGTGCATGTGGTGGTGAATTATCATCTTTTGATTTGTTGGAGCAACAATTGGTATCCAATGTAAGGGCACAAGAAGTTGCAGATGTGTGTTTTACAAACGAAAATGCATTTGCAAGTAGCAAACTTCTAGTTCAGGATTCAGCACTGACCTCATTGTGCAGTATGGACAGAGGATCATTTCAAGACAAATTACAAAATTCACTGGATAACCAATATTCAACACAGTCTAGTGTAACAGATGTTGATTTTCCTTCAAGTTCAAATGCACTGCATGAACTCTCTGAGAACTTAGAGCCAGTTGATATGTCAGAAGAAATTTTGAAGTTCAGTTCCATGGATGACCTTTGCCAGTGGTTTGGTCCTTCTTCAGAGGATAGTATCAGCGAAGCAGTAATTGCATTGGACAACACCTTCACTGAATCACCGGAGTTTAATCCCACTTCCTTTGATCTGGTAGGAAGTAGttctataaataatatttcaatgaCATGCCTGCATAATTCCAATTCAGATGGGAAAGAAACATCTGTGGTTATGCATAGCACTGAAAAAGGTCTCTTGGATAGCATGGAACTTGATTTTAGCTATGATCAAGCTGATGAATGGTGGGCGAATACTCTTACACCAGTGGTGAGTGGTGTTACTGATACTGGCTTCTCCGAATGCATATCAGAGTTGAATACTGATACACTGACTGGCACCCGGAAGAGATTATTCTCAGAGTTAAGAATTGAAGAGCTTTTGAGAGGTGGTGCAAGTTACTATCCTTTTAATAGTTCTGAATTTGAGTATGAATTGTCGCCCAATAGGAGGCAGACAGTGGAATCTTCATCAATGAATAGAAATCCAATGCATTTCACCAACCTTCATAGGCCTGGCACTAGAGCAGACTTGGTGCAGCCCCTTTGTGACTTAGACAGCACAAACAATCTTCCAAGCAAGAAAGATACATTTCCAAAATTACAAGCAGGCATGCGGATTGATGATAGCCATAGCATTAATATTGGGAAGGCTGTTCCAGTACCCCCTCAAAAGCCAGAGGAACCTGCAAAGCCCACCAAGAAGAGGGCTAGGCCAGGGGAGAGTACTCGACCACGGCCAAAAGATCGTCAGCAGATCCAAGATTGTATTAAAGAGTTGAGAGGAATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGCACCATCAGATACATGCTCTTCTTACAAAGTGTCCTCAAGTATGCAGACAAGCTACaggaaccaaatgaaccaaAGCTTATTGAACAGGCAAATGAAGTGGTTCTAAAAGACAGTGGTGTGGCAGATAGCAAAAACTGTGGCATTACATGGGCATTTGAAGTGGCACACCAAACAATGCTATGCCCAATTATAGTTGAGGACATGAGTCTACCTGGCCACATGCTTATAGAGATGCTTTGTGAGGAGCAGGGTTTCTTCCTTGAGTTAATTGACATAGTTCGGGGTTTGGGGCTGAATATCTTGAAAGCCAAGatggaaaaaaggaagaaaaaactATGGGCACGCTTTATTGTTGAGGCAAACAGACACGTGACAAGGATAGATGTGTTTTGGTCCCTTATCCATCTTCTACAGCAAACAAACATCTCTGGCATTGATTCTTCTAATAAGCATTGCGATGTTATTGATGCCAATATTTAG 1968 0.4019 MGMFDMSGNSVLPLDCENNDLNGLLASISSASANNPFPSQYKAYEEAMASLQRDSFCLGDLLKGTMEAQVVLSDRDSADVLLKPNSSMNSLIAKNSCFGACGGELSSFDLLEQQLVSNVRAQEVADVCFTNENAFASSKLLVQDSALTSLCSMDRGSFQDKLQNSLDNQYSTQSSVTDVDFPSSSNALHELSENLEPVDMSEEILKFSSMDDLCQWFGPSSEDSISEAVIALDNTFTESPEFNPTSFDLVGSSSINNISMTCLHNSNSDGKETSVVMHSTEKGLLDSMELDFSYDQADEWWANTLTPVVSGVTDTGFSECISELNTDTLTGTRKRLFSELRIEELLRGGASYYPFNSSEFEYELSPNRRQTVESSSMNRNPMHFTNLHRPGTRADLVQPLCDLDSTNNLPSKKDTFPKLQAGMRIDDSHSINIGKAVPVPPQKPEEPAKPTKKRARPGESTRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLQSVLKYADKLQEPNEPKLIEQANEVVLKDSGVADSKNCGITWAFEVAHQTMLCPIIVEDMSLPGHMLIEMLCEEQGFFLELIDIVRGLGLNILKAKMEKRKKKLWARFIVEANRHVTRIDVFWSLIHLLQQTNISGIDSSNKHCDVIDANI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1494 655 MobiDBLite consensus disorder prediction 446 470 - -
Ssu7g1494 655 MobiDBLite consensus disorder prediction 422 470 - -
Ssu7g1494 655 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 455 504 IPR011598 GO:0046983
Ssu7g1494 655 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 29 654 - -
Ssu7g1494 655 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 468 511 IPR036638 GO:0046983
Ssu7g1494 655 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 29 654 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1494 Ssu-Chr7 31621195 31623753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1494 446 643 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.500 5.20e-63 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1494 - - gmx:100813558 1057.74