Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1493 ATGACAATGGCAATGACAATGCCTCTTACTCTAAGAAATAAGCTCAAGACTCTTTGTGCTTGTGGTGATGGCTGGTCTTATGCTATTTTATGGCGCTTTCATCCACGGAATTCCttGTTGTTGACTGTGGAAGAAGCATACTATGAAGAGCATCTGGGAGAAGAGATTGCCAACATGCATCCACAGGTCCACTTGCTGGGTGAAGGAATTGTTGGTGAAGCTGCTTTCATGGGGAAGCACAGTTGGGTGCACTCAGATGGTCAAACTCATGATTGGAATTTGACTGGGCAGAATATTTGTGAGGATGATTCTGGATTGCATCAACAGTTCTCCTCTGGTATAAAGACTATTGTGGTCATACCAGTAAAAGCATGGGGAGTGGTACAGCTTTGGATCCAGAAAGAAGATTTTGGAGAGAGTGGAATTTTTGGAGCAAGCACAAAGTCTGCTCACAGAGATAGATGA 465 0.4366 MTMAMTMPLTLRNKLKTLCACGDGWSYAILWRFHPRNSLLLTVEEAYYEEHLGEEIANMHPQVHLLGEGIVGEAAFMGKHSWVHSDGQTHDWNLTGQNICEDDSGLHQQFSSGIKTIVVIPVKAWGVVQLWIQKEDFGESGIFGASTKSAHRDR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1493 154 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 9 130 - -
Ssu7g1493 154 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 130 IPR025610 -
Ssu7g1493 154 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 9 130 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1493 Ssu-Chr7 31619171 31621190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1493 15 149 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G64625 39.259 1.87e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1493 - - gmx:100813558 256.529