Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1468 ATGTGGTGGCCAAGATGCCAAAGGAAGCTTGCCTCACCACCAAGACCAGTGGGGCACGTGAGATCATTGAAGAGGCTGGTTTGGATGGTCATTTGGGGCTGGCATTTGCCATCATGTATGAGAGAAGCTTGGCTGGGGACTCCCCTTGGGCTGGCTACCTTCAGCTCCTGCCTTACCAAGAGTGTGTGCCTATTGTTTGGACCCTCAGTGAAGTTAACGACCTCTTGTGTGGTACTGAGCTTCACCAGGCAGGCAGTGCAAGAAGACAAGGCTCTTATCTATGAGGACTGGAAAGAGAATATTCTTCCCCTATTGGATTTAGCACCTTCAAAACTAAACCCAAAATTCTTTGGCATAGAACAATACTTTGCAGCAAAAAGTCTTATATCTTCACGATCCTTTCAGATTGATGATTACCATGGTTTTGGCATGGTTCCCCTGGCAGATCTATTCAATCATAAAACGGGTGCGGAGGATGTGCATTTCACTGCCATGTCCTCTAATTATGAATCTGACACTGATGTTGATGGTTGTAAAAATGATGAGGGCATTGTTGATGAAGAAGCATTGACTCAAAATTCCTCTATAGATATGAATGCGTTAAATACTGCTCAAGTTGGGAACTGCATTGTTAGTGACTTGGAGTGTTCTTCAGTTAGTGAGGGTGATACTTCTATGCTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAGCCGAGGTATTTAATACTTATGGGCTATTGGGCAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAATTCTTATGATATTGTAAACATAGATTTGGAACTGGTACTTCAATGGTGTTCTTCTGTGTTTTCTGACCGCCACAGTAGAGCAAGAGTCTTCCTGTGGAGAAGGTTAGGCTATTCTGCATGTGGCAGCCAAAACCCTGAATATTTTGAGATCTCATTTGATGGAGAACCACAAATTGAACTCCTCATTTTATTACACATCATGCTATTACCAGATAATGCCTACCATAACTTAGACCTATCAGTATCAGTTGCTGGAAATTGTCATGAATCAAGTGGAACCACCCTTCTGAATGATAATATCTTTCCTAGTAAAGCATTTAATATGAGCAAGAAATCCTTGCTGCCTAAAAATGTTTGTGATGCCCTGTTGTCACTTGCTGATATGAGGGAAAGTCTCTATGGTTTGAAATCAATTGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTTAGTTAGAGAGAAAAAGTTGTATCATTCTTTGAGGCTGCGCATCAATGAAAGGAAGATCCTTCAAAAGCTCAGAAATTATGCTTCACAGCCACTTAAAGGCACTAACCATAGTTCTCCGAGGAAGAAGTTGAAAAGGACAACAAAGAAAAcgagttga 1398 0.4106 MWWPRCQRKLASPPRPVGHVRSLKRLVWMVIWGWHLPSCMREAWLGTPLGLATFSSCLTKSVCLLFGPSVKLTTSCVVLSFTRQAVQEDKALIYEDWKENILPLLDLAPSKLNPKFFGIEQYFAAKSLISSRSFQIDDYHGFGMVPLADLFNHKTGAEDVHFTAMSSNYESDTDVDGCKNDEGIVDEEALTQNSSIDMNALNTAQVGNCIVSDLECSSVSEGDTSMLEMIMIKDVSSGAEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSVFSDRHSRARVFLWRRLGYSACGSQNPEYFEISFDGEPQIELLILLHIMLLPDNAYHNLDLSVSVAGNCHESSGTTLLNDNIFPSKAFNMSKKSLLPKNVCDALLSLADMRESLYGLKSIEDDIEALGRCSLVREKKLYHSLRLRINERKILQKLRNYASQPLKGTNHSSPRKKLKRTTKKTS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1468 465 ProSiteProfiles SET domain profile. 60 246 IPR001214 GO:0005515
Ssu7g1468 465 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 70 442 - -
Ssu7g1468 465 SUPERFAMILY SET domain 82 164 IPR046341 -
Ssu7g1468 465 SUPERFAMILY SET domain 222 265 IPR046341 -
Ssu7g1468 465 MobiDBLite consensus disorder prediction 451 465 - -
Ssu7g1468 465 MobiDBLite consensus disorder prediction 439 465 - -
Ssu7g1468 465 Gene3D set domain protein methyltransferase, domain 1 78 259 - -
Ssu7g1468 465 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 70 442 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1468 86 464 NAC Transcription Factor Family AT3G56570 51.852 1.40e-119 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1468 - K05302 gmx:100794971 642.114