Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1462 ATGGCTTCAATGAATAACCAAGAAGCAATTGAGCTCCTTGAAGGCCAAAGTCTTTTGTACATGCAGATATTTGGCCACTTAAGAACTATGTGTCTTAAGTGGGCTGTTGAACTAGGTATTCCTGACATAATATACAACCACGGGAAACCCATTACTCTTCCTGAGTTGGTCTCAACTCTGGAAATTCCACCAGCTAAGGCTGGTTTTGTGCAGCGGTTGATGCGCTTTTTGGCACACAATGGAATCTTTGATATCCATGAGAGGCAAGAAGATCATGGATTAACATATGCTCTAACCCCTGCATCAAAGCTTCTAGTCAGTGCCAGTGACCATTGTTTATCTCCAATGGTTCGGTGTGTTACTGATCCACTTCTGATGAGTAAATACCATCACTTGGGGGAATGGATTCGTGGGGAGGACCTTACAGTATATGAGACAGCCTTAGGGACAAGCGTTTGGGGACTTATTGAGAAACAACCTACATATTTGAGTCTCTTCGCTGAGGGTATGGCAAGTGATTCCCGAATGGTAGACTTGGCACTCAAAAATTGCACTTCAGTTTTTGAGGAGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACAGCCAGAATTATCTGCAAGGCATTTCCTAGGTTGAAATGTGTTGTGCTTGACCTTCCTCAGGTGGTAGCAAACTTGACAGGAAGCgataatttaagttttgtcgGTGGTGACATGTTCAAATTTGTCCCTCAAGCTGATGCAGTTCTGCTAAAGTGGGTTTTACATGATTGGAATGACGAAAATTGCATAAAGATCCTGAAAAAGTGTAAAGATTCTATTTCGAGCAAAGGCAATAGAGGGAAAGTGATTATCATTGATACAGTAATAGATGAAAAGCTAGATGAGCGAGATATGACTCAAACAAAGCTATGTATGGATATATCTATGTTGGCCATTAATGGAAAAGAGCGAACTGAAGAAGAATGGAAACAACTCTTCATTGAAGCAGGATtcaaacaatacaaaatatttcCCGTTTTTGGCTTTAGATCTCTTATTGAGGTCTATCCTTAG 1065 0.4028 MASMNNQEAIELLEGQSLLYMQIFGHLRTMCLKWAVELGIPDIIYNHGKPITLPELVSTLEIPPAKAGFVQRLMRFLAHNGIFDIHERQEDHGLTYALTPASKLLVSASDHCLSPMVRCVTDPLLMSKYHHLGEWIRGEDLTVYETALGTSVWGLIEKQPTYLSLFAEGMASDSRMVDLALKNCTSVFEELDSIVDVGGGTGTTARIICKAFPRLKCVVLDLPQVVANLTGSDNLSFVGGDMFKFVPQADAVLLKWVLHDWNDENCIKILKKCKDSISSKGNRGKVIIIDTVIDEKLDERDMTQTKLCMDISMLAINGKERTEEEWKQLFIEAGFKQYKIFPVFGFRSLIEVYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1462 354 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Ssu7g1462 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Ssu7g1462 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Ssu7g1462 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Ssu7g1462 354 Gene3D - 1 105 IPR036388 -
Ssu7g1462 354 CDD AdoMet_MTases 194 293 - -
Ssu7g1462 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Ssu7g1462 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Ssu7g1462 354 PANTHER O-METHYLTRANSFERASE 2 353 IPR016461 GO:0008168
Ssu7g1462 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Ssu7g1462 354 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1462 Ssu-Chr7 31095430 31096605 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1462 17 352 Monolignol Biosynthesis Gene Families AT5G54160 32.754 4.41e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1462 K22588 - gmx:100819853 590.497