Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1461 ATGGATTCGTGGGGGGACCCTAGAGTATATGAGATAGCCTTAGGGACAAGATTTTGGGGACTTATTGAGAAACCACCTACTTATTTGAGTCTCTTCACTGAGGGTATGGCAAGTGATTCCCAAATGGTAGTCTTGGCACTCAAAAATTGCACTTTAGTTTTTAAGGAGCTAGATTCCATTATGGATGTAGGTGGTGGAACTGGAACCACAGCCAGAATTATCTGCAAGGCATTTCCTAGGTTGAAATGTGTTGTGCTTGACCTTCCTCAGGTGGTAGCAAACTTGACAGGAAGCgataatttaagttttgtcaGTGGTGACATGTTCAAATTTGTCCCTAAAGTTGATGCAATTCTGTTAAAGgtgtaa 369 0.3984 MDSWGDPRVYEIALGTRFWGLIEKPPTYLSLFTEGMASDSQMVVLALKNCTLVFKELDSIMDVGGGTGTTARIICKAFPRLKCVVLDLPQVVANLTGSDNLSFVSGDMFKFVPKVDAILLKV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1461 122 Gene3D Vaccinia Virus protein VP39 2 122 IPR029063 -
Ssu7g1461 122 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 7 122 - -
Ssu7g1461 122 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 120 IPR029063 -
Ssu7g1461 122 PANTHER O-METHYLTRANSFERASE 7 122 IPR016461 GO:0008168
Ssu7g1461 122 Pfam O-methyltransferase domain 8 121 IPR001077 GO:0008171
Ssu7g1461 122 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 122 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1461 Ssu-Chr7 31091545 31092016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1461 26 121 Monolignol Biosynthesis Gene Families AT5G54160 36.458 4.80e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1461 - K22588 gmx:100818947 174.866