Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1451 ATGCTCGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTTTGCTTCTTGATGGGGGTACGTTGAACTACTTCGGGAAACCTATCCCCATCAATCTTCTTGTTGCTGTTATTGCTGAGATAGTTCTTGTGGGTGGTGCTGAGTACTACAGAATTACTAATAGCCTGGATTTCGAAGACAAGCTTCATCCAGGTGGTCCATTCGACCCATTGGGGCTAGCAAATGATCCAGACCAAGCTGCACTGCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCAATGCTTGGTTTCTTCTTCCAAGCTTACGTCACCGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTGATTTCTGGGTCTGCTGAGAGGGCTCCAACTTTGTGA 480 0.4625 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLLVAVIAEIVLVGGAEYYRITNSLDFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1451 159 Pfam Chlorophyll A-B binding protein 1 122 IPR022796 -
Ssu7g1451 159 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 159 IPR001344 GO:0009765|GO:0016020
Ssu7g1451 159 SUPERFAMILY Chlorophyll a-b binding protein 1 149 - -
Ssu7g1451 159 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 159 - -
Ssu7g1451 159 Gene3D Chlorophyll a/b binding protein domain 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1451 Ssu-Chr7 31003897 31005494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1451 1 159 Chloroplast and Mitochondria Gene Families AT4G10340 90.566 1.39e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1451 K08916 - gmx:100789786 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1451 7 31003897 31005494 Ssu7g1451 7 31003897 31005494 ECH
Ssu7g1451 7 31003897 31005494 Ssu7g1451 7 31003897 31005494 PCT