Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1449 ATGGGTGTATATAGGAAAAATGGATCTTCTTTGGTCAGTCTTGAGTACTCTACTGGATGGGACCCTTTGGCTGATAGTAGGAATTTCAATGGGTATAGTCAAGATATATTCCGGAGTTTGAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAGTACTTCTCGGAGTTGAATTTGTTGGGTAAGAATAGCTTTAGTGCAACATATAAAGGAGTTTTAAGAGATGGATCCGTTGTTGCTGTGAAGAGCATCAGTAAAACTAGTTGCAAGTCGGATGAAGCTGAGTTTATGAAGGGATTGAACATGTTGACCTCACTGAGGAATGATAATGTAGTGAGGTTGAGGGGATTTTGTTGTTCAAGAGGACGAGGTGAATGCTTTCtgatttatgattttgtttctaATGGAAACCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAGGGGATTGCTAAAGGTATGGCATATTTGCATGCATACAAAGCAAACAAATCCGTTCTGGTTCACCAAAACATCTCAGCTGACAAAGTTCTCATTGATCAGCTGTTCAATCCATTGCTGGCAGATTCTGGCCTGTACAAGCTTCTTACTAATGATATTGTCTTCTCTGCACTCAAGGGTAGTGCAGCAAAGGGTTACCTGGCTCCTGAATACGCCACTACTGGCCGGTTTGCCGAGACAAGTGATGTTTATGCTTTTGGGGTGCTGCTTTTCCAGATCCTTTCAGGGAAGCATGAGATCACTAGCTCAATAAGGCTTGCTGCAGAGTCCTCCAAATTCCAAGAATTTGTTGACCCGAATCTCTATGGAAGATTCTTTGAATATGAAGCAGCTAAACTGGCAAAAATAGCTTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGACCATCCATGGAAACCATTGTTCAAGAACTGGGCAATTGTAGTAGCTGTCTTTGA 981 0.4149 MGVYRKNGSSLVSLEYSTGWDPLADSRNFNGYSQDIFRSLRFNLEEVESATQYFSELNLLGKNSFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFMKGLNMLTSLRNDNVVRLRGFCCSRGRGECFLIYDFVSNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKSVLVHQNISADKVLIDQLFNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRFAETSDVYAFGVLLFQILSGKHEITSSIRLAAESSKFQEFVDPNLYGRFFEYEAAKLAKIALLCSHESPFERPSMETIVQELGNCSSCL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1449 326 Pfam Protein tyrosine and serine/threonine kinase 58 319 IPR001245 GO:0004672|GO:0006468
Ssu7g1449 326 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 324 - -
Ssu7g1449 326 Gene3D Transferase(Phosphotransferase) domain 1 133 325 - -
Ssu7g1449 326 PIRSF ILK 38 325 - -
Ssu7g1449 326 SUPERFAMILY Protein kinase-like (PK-like) 29 319 IPR011009 -
Ssu7g1449 326 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 3 324 - -
Ssu7g1449 326 Gene3D Phosphorylase Kinase; domain 1 25 132 - -
Ssu7g1449 326 ProSiteProfiles Protein kinase domain profile. 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1449 Ssu-Chr7 30983866 30985043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1449 8 167 Miscellaneous Gene Families AT4G22730 61.446 3.39e-64 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Ssu7g1449 PK_Tyr_Ser-Thr 2.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1449 - - gmx:100775422 611.683