Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1418 ATGGCTCGGGATGGGAGCGTGGTCCCTGCGGACCCGCAGGCAATGGCGGTTGTGAAGAAGAAGACACAGTCTTCGAGGAGTTGGATTCTGTTTGATGCCACGGGGCAGGGCTCCTTGCTCGACGTCGACAAATATGCCATCATGCATCGGGTTCAGATTCACGCTCGTGATCTCAGAATCCTTGATCCCTTGCTCTCTTACCCCTCCACCATTCTCGGTCGCGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACCGCGGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTGATCCCTGTTGTTGAGGAACTGCAAAGGCGATTGCCTCGATTAACTGCCTGCTATCAACAACAAGGAGAAGGTAAAGAGTATCTTGGTGGCCAAAATGATGCTGAAGCAGCTGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGTACGACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAATTGctggatgatgatgatgatatggCTGACCTATACCTGTCAAGAAAGGCAGGTTCATCGTCACCAGTTAGTGGATCAGGTGCTGTAAATTGGTTTGCTGCCTCCCCCACCATAGGATCGAAGATATCTAGAGCAAGTAGAGCAAGTGTAGCAACAGTTCGTTTAGATGAAAATGATGTGGAAGAGCTTGAGATGTTACTTGAGGCTTATTTCAGTGAAATTGATCACACATTGAACAAATTAACCACACTACGAGAGTACATAGATGATACtgaagattatattaatattcaaCTTGACAACCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCTGGAACTGTTTGTCTATCTTTCTACTCTTTGGTTGCTGCTATATTTGGAGTGAATATCCCATATACTTGGAACAGCAACCATGGTTACATGTTCAAATGGGTAGTTATTGTCTCAGGAGTAATTTCTGCGTTGATGTTTCTCCTGATTACAGCCTATGCTCGCAAAAAGGGGTTAGTTGGATCGTGA 1182 0.4365 MARDGSVVPADPQAMAVVKKKTQSSRSWILFDATGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLPRLTACYQQQGEGKEYLGGQNDAEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSSSPVSGSGAVNWFAASPTIGSKISRASRASVATVRLDENDVEELEMLLEAYFSEIDHTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGVNIPYTWNSNHGYMFKWVVIVSGVISALMFLLITAYARKKGLVGS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1418 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Ssu7g1418 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Ssu7g1418 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
Ssu7g1418 393 Pfam CorA-like Mg2+ transporter protein 271 381 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu7g1418 393 Coils Coil 194 221 - -
Ssu7g1418 393 Gene3D Magnesium transport protein CorA, transmembrane region 106 323 - -
Ssu7g1418 393 Gene3D - 13 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1418 Ssu-Chr7 30410467 30415511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1418 1 366 MRS2 Gene Family AT5G64560 81.522 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1418 K16075 - gmx:100810239 694.115