Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1402 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTACTTAGGTGTTAATGTTCAAAGTGGAGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCCCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGGGGAACTGGTATACCCCATCTGAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTGAAAACAGTTCTGATGCTGGCAGATCAGCTAATAAACAGAGTTGAGTACATGCACTCCCGGGTTTTCTTCATCGCGATATAA 387 0.4264 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRVFFIAI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1402 128 ProSiteProfiles Protein kinase domain profile. 9 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1402 128 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ssu7g1402 128 Pfam Protein kinase domain 10 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1402 128 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Ssu7g1402 128 PANTHER CASEIN KINASE 1-LIKE PROTEIN 7 1 125 - -
Ssu7g1402 128 SUPERFAMILY Protein kinase-like (PK-like) 4 122 IPR011009 -
Ssu7g1402 128 PANTHER CASEIN KINASE-RELATED 1 125 - -
Ssu7g1402 128 Gene3D Transferase(Phosphotransferase) domain 1 86 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1402 Ssu-Chr7 30198000 30199597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1402 6 48 MAP Kinase Kinase Kinase AT1G63700 44.186 5.96e-06 42.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Ssu7g1402 Pkinase 4.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1402 K08960 - cpap:110807649 250.751