Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1395 ATGGGATTCTATCTTAATCTCAAACGCAAGGCATTCCGGCTGAAACGGTTTCTGCTAGGACATGGAGGCAGAAAAAGAAAGCACAAGCTGGCAAAGAAGCCTTCATGGATGATGCCAATATCATATGGTTATCATGTGGTGGAGCATAATATGACCGGGGATGATTCTGATGACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGCAAACGGATCACACAGAATTGTGGTATTTTGGAATCTTTGACGCACTGATTGGAGACAAGGTTACCAAATACATGCAGTCTAATTTCTTTGACAAGAAGCTTCAAGAGTCTCATATAAGGAGAAAAAGCAAGGAAGCTCTGAAGAAAGCTTACCTTGGTGTAAGAGTAAAGATCAGAGAGGAACACAAATTAGAGGAAACATGCAGAATGGGTTCAGCATCTGTTATGATGATCAATGGAGAAAAACTTGTAGTAGCCAACATGGGAGATTACAGAACAGTTGTGTGCAGAGATGGCATAGCTCATCAGACAACTGGCAAATACCAACAATCAGCGAAAATACATTGGTCTCGCAGACTCTTTGCAGGACACATGCTAGCATGTCAATCAGGAAATGCAGCAGGTGCAAAGCATTCTAAAGGCTCTGAACTTGTCGTTAGAAGTGAAAGGATTGATTCTGATACTGAATTTCTGATATTAGCAAGCAATGGCATATGGGAGGTGTTGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCCTGGCAAAGGAAGCTCTAGTTAGGATGAGCAAAAGCAACATCTCATGCTTAATCATTCGCTTTGACTGA 846 0.4196 MGFYLNLKRKAFRLKRFLLGHGGRKRKHKLAKKPSWMMPISYGYHVVEHNMTGDDSDDSDFDSVVAQREQTDHTELWYFGIFDALIGDKVTKYMQSNFFDKKLQESHIRRKSKEALKKAYLGVRVKIREEHKLEETCRMGSASVMMINGEKLVVANMGDYRTVVCRDGIAHQTTGKYQQSAKIHWSRRLFAGHMLACQSGNAAGAKHSKGSELVVRSERIDSDTEFLILASNGIWEVLKNQEAVNLISHIEDPQEAAECLAKEALVRMSKSNISCLIIRFD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1395 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 280 - -
Ssu7g1395 281 ProSiteProfiles PPM-type phosphatase domain profile. 58 280 IPR001932 -
Ssu7g1395 281 CDD PP2Cc 78 280 IPR001932 -
Ssu7g1395 281 Gene3D - 44 281 IPR036457 -
Ssu7g1395 281 Pfam Protein phosphatase 2C 70 174 IPR001932 -
Ssu7g1395 281 Pfam Protein phosphatase 2C 217 273 IPR001932 -
Ssu7g1395 281 SUPERFAMILY PP2C-like 45 281 IPR036457 -
Ssu7g1395 281 PANTHER ALPHABET, ISOFORM E-RELATED 5 280 - -
Ssu7g1395 281 SMART PP2C_4 48 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1395 Ssu-Chr7 30086527 30088571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1395 1 280 PP2C-type Phosphatase Gene Family AT3G23360 47.163 2.59e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1395 K19704 - gmx:100785227 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1395 7 30086527 30088571 Ssu7g1395 7 30086527 30088571 ECH