Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1394 ATGCCTTTCAAGAGGTACGTCGAGATCGGGAGGGTTGCTCTCATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATCGTCGACGTCATTGACCAGAACAGAGCCCTTGTCGATGCCCCTGATATGGTGAGGTCCCCAGTCAATTTCAAAAGGCTTTCTCTCACTGATATTAAGATTGACATTAAGAGGGTCCCTAAGAAGAAGGATCTTGTTAAAGCCATGGAGGCTGCTGATGTTAAGAACAAGTGGGAGAAGAGCTCATGGGGCAGAAAACTCATTGTTAAAAAGAGAAGGGCATCCCTCAATGATTTTGATAGGTTCAAGCTTATGTTGGCCAAGATCAAGAGGGCAGCTGTGGTAAGGCAAGAGGTTGCTAAGCTGAAAAAGAGCGCTTAG 399 0.4687 MPFKRYVEIGRVALINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSPVNFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWEKSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAAVVRQEVAKLKKSA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1394 132 Gene3D - 1 84 IPR014722 -
Ssu7g1394 132 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 132 - -
Ssu7g1394 132 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Ssu7g1394 132 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Ssu7g1394 132 Gene3D - 92 127 - -
Ssu7g1394 132 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Ssu7g1394 132 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1394 Ssu-Chr7 30080543 30081359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1394 1 131 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 81.679 1.42e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1394 K02875 - gmx:100499889 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1394 7 30080543 30081359 Ssu7g1394 7 30080543 30081359 ECH