Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1350 ATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCTGCAGTGTTTGCCATGCAGGGATTTGGGATCTTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATACAAGCTTCCTAGTtatgaagaaaacaaaacaggATCAATAGTGCATTCCCTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAGTCCCAGCTGCGCTTACTTACTACTGGCGAATGAAGATGCCAGAGACAGCTCGTTACACGGCCCTTGTAGCTAGAAATGCAAAACAAGCCGCTTCAGACATGTCTAAGGTGTTGCAAGTTGAGCTTGAAGCTGAAGAGGATAAGTTGCAGCATATTGTTGAGAATGATAACCAAAGGTATGGTTTGTTCAGCAAGGAATTTGCCAAACGCCATGGACTGCACTTGGTGGGAACCGCAGTTACTTGGTTCTTATTGGACATTGCCTTCTATAGCCAGAACCTTTTCCAAAAGGACATTTTCACTGCCATTGGATGGATCCCTCCTTCACAACAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGTACTGTGCCGGGGTACTGGTTTACCGTGGCCTTTATTGATTACATGGGCCGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCTATACCTTACAATCACTGGAGCAAGAAAGACAACAGAATTGGGTTTGTTGTGATGTACTCTCTCACCTTCTTCTTCTCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGATCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTGGGTGCATTTGGGTTCTTGTATGCTGCACAAAGTAAGGACCCCTCCAAGACTGATCCAGGTTACCCAACTGGTATTGGGGTTAAGAACTCCCTCATTATGCTTGGCGTGATCAACTTCTTTGGAATGGTATTCACCTTGTTAGTACCAGAATCAAAGGGAAATCACTGGAAGAGTTGA 1089 0.4353 MSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYKLPSYEENKTGSIVHSLDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVELEAEEDKLQHIVENDNQRYGLFSKEFAKRHGLHLVGTAVTWFLLDIAFYSQNLFQKDIFTAIGWIPPSQQMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWSKKDNRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDPGYPTGIGVKNSLIMLGVINFFGMVFTLLVPESKGNHWKS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1350 362 SUPERFAMILY MFS general substrate transporter 1 357 IPR036259 -
Ssu7g1350 362 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 358 - -
Ssu7g1350 362 Gene3D MFS general substrate transporter like domains 1 114 IPR036259 -
Ssu7g1350 362 Gene3D MFS general substrate transporter like domains 122 362 IPR036259 -
Ssu7g1350 362 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 357 IPR020846 GO:0022857
Ssu7g1350 362 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 358 - -
Ssu7g1350 362 CDD MFS_PhT 1 356 - -
Ssu7g1350 362 Pfam Sugar (and other) transporter 2 357 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1350 Ssu-Chr7 29205080 29206168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1350 1 358 Inorganic Solute Cotransporters AT5G43360 78.771 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1350 K08176 - gmx:100802890 654.055