Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1339 ATGCTCAACACCATACCAACCCTTACCTTTATTATTGCAGGGGCACTCAGGTTGGAGGTTCTTGATCTTCGAAATCCTCGAGGAATAGCAAAAGTTTTAGGGACCTTGATCTCCCTAGCTGGTGTTTTGATCATGACACTATACAAAGGACTCATTATGAGAAATTTATGGCGTCCTCTGATCCATATTCCAGGAAAAAGTGCTGCTATTAATGAGAGCTGGTTAAAAGGTTCACTTCTTAACAATGTCAAGCTGTATTACATGGTCTATAAGGAATACTACGCAGCACAATCAGCTGTTTTCACAGTTATAGCAGAGCACAACCGTTCAGCATGGACTATAGGGTTCAACATTGATTTGTGGTCCACAATAAATGGGAGTTGTCGTTGCCGGTTTGATAATCTATGTTCTACAATGGTGCAAGGAGAAGAAAGGGCCAGTTTTGTCACAATGTTTTACCCTCTTTCTACCATATTAGTGGCATGTCTAGCATACTTCATCCTAGATGAGAAACTTTATTTGGGCAGCATCATAGGAGCATTTACAGTCATCATTGGTCTGTACTTGCTACTGTGGGGCAAAAGTGAGCAAGAGGTTTTGCAGTGCAGTACTGAAGACCCAGAATGCAGAATATAG 636 0.4135 MLNTIPTLTFIIAGALRLEVLDLRNPRGIAKVLGTLISLAGVLIMTLYKGLIMRNLWRPLIHIPGKSAAINESWLKGSLLNNVKLYYMVYKEYYAAQSAVFTVIAEHNRSAWTIGFNIDLWSTINGSCRCRFDNLCSTMVQGEERASFVTMFYPLSTILVACLAYFILDEKLYLGSIIGAFTVIIGLYLLLWGKSEQEVLQCSTEDPECRI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1339 211 PANTHER WAT1-RELATED PROTEIN 1 81 - -
Ssu7g1339 211 PANTHER WAT1-RELATED PROTEIN 95 201 - -
Ssu7g1339 211 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 195 - -
Ssu7g1339 211 Pfam EamA-like transporter family 141 191 IPR000620 GO:0016020|GO:0016021
Ssu7g1339 211 PANTHER WAT1-RELATED PROTEIN 1 81 IPR030184 GO:0016021|GO:0022857
Ssu7g1339 211 PANTHER WAT1-RELATED PROTEIN 95 201 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1339 Ssu-Chr7 28870492 28872105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1339 1 210 Nodulin-like Gene Family AT5G07050 31.890 8.77e-32 117