Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1297 ATGGGGAAGTACATGAAGAAAGCGAAGCCGAAAGGAGAACTCGCGCTGGTGGACTCCACCACCAGCAACACCACCACCTCCTACATGGGGGTTCGAACCCGCGCCAAAACCCTAGCGCTCCAGAAATCGCGCCCGCAACCCGAACTCGCTCCCACCTCCGATTCCTACCTTCAGCTTCGGAGCCGTCGCCTCCGGAAGCCTCCGATTTCGCTCCACTCTACCAAGCGGAACAAACACTCGAACCCTAAATCCCCAACCGCCGACCCTCCCAGGCTCGGACTTGCTTCGGAGCACGAACCGGCTCTCACCGCCCGCGACCACAAGCGCCAGGAGGAGAATGCTCTGCATGAGAATGCCGAGGTTCAGGAAGCGTCGTTCGGGGAAAATGTTTTGGATTTTGAAGGTAGAGAGAGCAGAAGCACTAGGGAATCCACACCTTGCAGTTTGATAAGGGACTCAGATACTGTCAGGACTCCTGGGTCAACTACCAGGCCTACTTGCTCAACTGAAGCTTATCGAAGAACGGAGCCCGCAGCTAGAAGGCAAATCCCAACTTCCCGTGAAATGGATGAATTCTTTGCTGAAATTGAAGAGGCTCAGCAAAGGCAGTTCATTGAGAAGTACAACTTCGATCCTGTGAATGAGAAGCCACTCCCCGGGCGTTATGAATGGAAAAAGTTGAAACCCTAG 690 0.5435 MGKYMKKAKPKGELALVDSTTSNTTTSYMGVRTRAKTLALQKSRPQPELAPTSDSYLQLRSRRLRKPPISLHSTKRNKHSNPKSPTADPPRLGLASEHEPALTARDHKRQEENALHENAEVQEASFGENVLDFEGRESRSTRESTPCSLIRDSDTVRTPGSTTRPTCSTEAYRRTEPAARRQIPTSREMDEFFAEIEEAQQRQFIEKYNFDPVNEKPLPGRYEWKKLKP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1297 229 MobiDBLite consensus disorder prediction 142 170 - -
Ssu7g1297 229 MobiDBLite consensus disorder prediction 16 32 - -
Ssu7g1297 229 Gene3D p27 175 229 IPR044898 -
Ssu7g1297 229 Coils Coil 104 124 - -
Ssu7g1297 229 MobiDBLite consensus disorder prediction 1 186 - -
Ssu7g1297 229 MobiDBLite consensus disorder prediction 65 79 - -
Ssu7g1297 229 PIRSF CKI_KRP_plant 1 229 IPR044275 GO:0004861|GO:0045736|GO:0051726
Ssu7g1297 229 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 225 - -
Ssu7g1297 229 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 225 IPR044275 GO:0004861|GO:0045736|GO:0051726
Ssu7g1297 229 MobiDBLite consensus disorder prediction 100 118 - -
Ssu7g1297 229 Pfam Cyclin-dependent kinase inhibitor 183 227 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1297 Ssu-Chr7 28152681 28154880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1297 1 229 Core Cell Cycle Gene Families AT5G48820 39.535 3.02e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1297 - - pvu:PHAVU_007G133100g 393.66