Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1284 ATGAGCAATGAGGAACCTGGCATTTCAGGCAAGCAATATATAGATGCGGTGAGTGTTGGTTTAAGCGACGGAATCTCTTCTGATAATGATGTAGACAATATATGTCTACAGACGGGTGAAGAATTTTCTGCCGAGTTCTTGCGTGATCGGGTTGCCTTAAGGAGATTTCCTGTCATAACTGATGCAGACCAGCGTCTGCCAAACAGGTTGGATGTTAGTATCAAAGATAACAATTATGAGCTGGTTTATGAGGATCTAAAGCATGTTCTTGGGCTAAGGAGAACAGATTCTGATAGTAACTCTGATTTGTCAGAGATTGCTTTCGCCAGAGGATATGTTGCAGAAGTTGACAACAGGGCTCACCCTAATAACTTGAACAGATACCAGTGTGAACACGGTGGTTTCAGACAGGCATCAGGTACATTTTGCAGACAATTATCAGGTAAATTTTCTGAGGGGAATGGTTGTGATGAAGTCAATTCAGGACCAAATACTCCATCTATTTACGTCTTTGAGTCTCCTCATTCATGCCATCCTCATGGATCAGTATTCTCAGAAGATTCTTTCTATAAGAAGATAAAGTTTCTGTGTAGTTTTGGAGGTAGAATACTACCAAGGCCTAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATCAGGAAGAACATCTCATGGGAGGAACTTATGAGGAAGACTTCTGCTATTTGCAGTCAAACTCACGTTATCAAATACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTCTGTTCCAATGAGGATCTTCATCATATGATTGAGGAGTACGAAGAGCTTGAAAGAGCTGGAGGCTCTCAACGGCTGAGGATTTTTCTCATACCTTCAAATGAATGTGAGAGTCCAAGTTCCAATGAAGCAAGAGTCAATCAGCCAAGTGATGCAGATTATCATTATGTTGTTGCTGTTAATGGTATGCTGGATCCAAGTCCACGAAAGAACTCAAATGGGCTGAGTTTGGCAAGCCATACTAGCCAGTTTGGAAATACCTCTGATTACAACAGTCCACGTTTCCATAGAGACTCATGTCACTCATCCACATCTGCATTTGCTTCAGAGATGAAGGATTGCACCCCAACCTCTCCAAATTTGGGAGGCATACTCCCAAAACCTGGTCCTCAATTTTTAACAGCCCTAGCAGGCAAGTCATTCAATCAAATGTCTCCTTTATCTCCCATTTGTGTACAGCCTAAAGATCCCAAAATTTCTAATGTACAGCTGTTTATGGATAAACCATATAATGCTATTAATGAAAGCACTACTCCCTTTGTTATGGAAAAAGTTCCACACGATAACTCTTTGTACGTAGACAATACCAATTATGTTGATCCAGCTGCATACTGTAACAATCTTGCTCAAGGGCATACACGTGTGAATTACCATCCTAATAATCAATATATAGTGGAGTCTGACCAGATCAGGAAGCCTGGCGAGAATCTTCATCTTCACAGATGGAACAACAGTAACGAGTTTGTCTCTTCTGCAGTATGTAGTCTAACTGATATGATTTTTGAGAGACCTTTAGTTACCAATGAAGGTTCATATCATTTTAACAAGATTGTCTCTCATCCTCATGAGTCATCAAGTTTATTCTCAGAGTCTGATGTTAGAGAGGGATCTCAGTACAGAATGTTGCATGCACATTCTGACTCAACACTTAAGGAGAATGATGAGAACTATAAAGTTCACTTGCACTTTCCCCTTAGTGTAGAGAGAGACAATTTGCCATCACTGAAAAATTCAAGTTCTTTAGAAGAATGTTCAATACAGCCTGGAAGGATAATTGATAGGAAAGAACACTTGGCTAAGTATCAAAATTTGCCCATTTTTGGAATGATTGATAGTTTTCAGAGAGTGTCAGAAATTGGTAAAGAGAGCTTGCAACATGCAGATAAAAGCAATGATTTCTTTGACACAAATGTTGGAGCTATGTCACGAGTCAATGCCATAGATTTAAAACATTTACAGTACATCTACTCTCCACATGGTGTTTGCTCATCTTCACCTGATTTACAAAGCAGTGAATCTACtgcatcatttatctctttagAATCCGCAAGAAACCTAAGGGGGCAACCACATGGTCTACCATTAGACAGAACTGCTTCTGAGTTTTCCATGAGGAGCCAAAATTCATCAATAGAATCCACAAGAAACCTAAGGGGGCAACCACATGGTCTACCATTAGACAGAACTGCTTCTGAGTTTTCCATGAGGAGCCAAAATTCATCAATGTATCACCAATATGCTATGTTGGAGACAAAAGACAGTCAACAACTTCTCCCTGGCTCTTTTGTGTTACAACCTATTGAGTCCCAAACTGACAAAGAGTCCATACCACTTATCTCATATAAGGACATGGGTTCTTCTCCCATAAGAGAGGTTGTTATCCCTGTTGAAGATCCTGCATACTACCTGCtccaaaaggaagaaaacatAGTCATTAAGAATCAGTCTTCTGAATATATCAATGAATTTTGTGTCAACAAGCCAGTGCCAGAATCAGTGGCTGTTGTCAAGGGACCAATGGATTATATTTCTTCAGGTATCCAGTCATGCTTAAAAGTTGAACCTACATCTCCTGAAAAGGAAGGGATAGAATGTGATAATCCAGAAGCTGAAAGTAAGCATGCAAAATCTGATAGGGGAAACTTCAATTTCAATAAGCCCACTGATGATAGAGCAACTGCTGAAACAGAGGCTGAAATTTATGGTTTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACGGATGTTGCaattaagagaataaaaagTAGTTGTTTCTCTGATAGATTGTCCGAACAAGAGCGGTTGACTAAAGATTTTTGGAGAGAGGCACAGATTCTATCAACTCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTAGTGCCAGATGGCCCAGGTGGAACATTGGCAACAGTAACAGAATACATGGTGCATGGATCACTGAGGAATGTTCTCATGAAGAAGGAGAAAGTGCTTGACCGTCGTAAAAGGCTTCTGATTGCAATGGATGCAGCCTTTGGGATGGAATATTtgcatttgaaaaatattgttcatTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTGGGCGACCCTGAACGACCAGTATGTAAGGTTGGAGATTTTGGCCTATCCAGAATTAAATGCAACACACTTGTTTCTGGTGGTGTCAGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGTTGCAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCGATGTGGGAAATCTTGACCGGGGAAGAACCATATGCTAACATGCACTGTGGTGCTATCATAGGAGGTATTGTCAATAATACGCTTAGGCCTCCTATTCCAAAACGATGTGATTTCGAGTGGAAAAAGCTGATGGAAGAGTGCTGGAGTCCTGATCCTGCAGCCAGGCCAACCTTCACAGAAGTGAAAAATAGACTTCGCAACATGTCAGCTGCGCTGCTCAAAAGGAGACATAACATTGGTAATCGATGA 3639 0.4007 MSNEEPGISGKQYIDAVSVGLSDGISSDNDVDNICLQTGEEFSAEFLRDRVALRRFPVITDADQRLPNRLDVSIKDNNYELVYEDLKHVLGLRRTDSDSNSDLSEIAFARGYVAEVDNRAHPNNLNRYQCEHGGFRQASGTFCRQLSGKFSEGNGCDEVNSGPNTPSIYVFESPHSCHPHGSVFSEDSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNISWEELMRKTSAICSQTHVIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGGSQRLRIFLIPSNECESPSSNEARVNQPSDADYHYVVAVNGMLDPSPRKNSNGLSLASHTSQFGNTSDYNSPRFHRDSCHSSTSAFASEMKDCTPTSPNLGGILPKPGPQFLTALAGKSFNQMSPLSPICVQPKDPKISNVQLFMDKPYNAINESTTPFVMEKVPHDNSLYVDNTNYVDPAAYCNNLAQGHTRVNYHPNNQYIVESDQIRKPGENLHLHRWNNSNEFVSSAVCSLTDMIFERPLVTNEGSYHFNKIVSHPHESSSLFSESDVREGSQYRMLHAHSDSTLKENDENYKVHLHFPLSVERDNLPSLKNSSSLEECSIQPGRIIDRKEHLAKYQNLPIFGMIDSFQRVSEIGKESLQHADKSNDFFDTNVGAMSRVNAIDLKHLQYIYSPHGVCSSSPDLQSSESTASFISLESARNLRGQPHGLPLDRTASEFSMRSQNSSIESTRNLRGQPHGLPLDRTASEFSMRSQNSSMYHQYAMLETKDSQQLLPGSFVLQPIESQTDKESIPLISYKDMGSSPIREVVIPVEDPAYYLLQKEENIVIKNQSSEYINEFCVNKPVPESVAVVKGPMDYISSGIQSCLKVEPTSPEKEGIECDNPEAESKHAKSDRGNFNFNKPTDDRATAETEAEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSDRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKKEKVLDRRKRLLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDFEWKKLMEECWSPDPAARPTFTEVKNRLRNMSAALLKRRHNIGNR 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1284 1212 Gene3D Phosphorylase Kinase; domain 1 925 1019 - -
Ssu7g1284 1212 PANTHER SERINE-THREONINE PROTEIN KINASE 83 1208 - -
Ssu7g1284 1212 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1057 1069 IPR008271 GO:0004672|GO:0006468
Ssu7g1284 1212 MobiDBLite consensus disorder prediction 878 912 - -
Ssu7g1284 1212 Gene3D - 211 294 - -
Ssu7g1284 1212 PRINTS Tyrosine kinase catalytic domain signature 1051 1069 IPR001245 GO:0004672|GO:0006468
Ssu7g1284 1212 PRINTS Tyrosine kinase catalytic domain signature 1014 1027 IPR001245 GO:0004672|GO:0006468
Ssu7g1284 1212 PRINTS Tyrosine kinase catalytic domain signature 1166 1188 IPR001245 GO:0004672|GO:0006468
Ssu7g1284 1212 PRINTS Tyrosine kinase catalytic domain signature 1122 1144 IPR001245 GO:0004672|GO:0006468
Ssu7g1284 1212 CDD PB1_UP2 196 292 - -
Ssu7g1284 1212 SMART PB1_new 207 294 IPR000270 GO:0005515
Ssu7g1284 1212 ProSiteProfiles Protein kinase domain profile. 932 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1284 1212 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 83 1208 - -
Ssu7g1284 1212 SMART serkin_6 932 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1284 1212 SUPERFAMILY CAD & PB1 domains 208 301 - -
Ssu7g1284 1212 Gene3D Transferase(Phosphotransferase) domain 1 1020 1211 - -
Ssu7g1284 1212 ProSitePatterns Protein kinases ATP-binding region signature. 938 959 IPR017441 GO:0005524
Ssu7g1284 1212 SUPERFAMILY Protein kinase-like (PK-like) 921 1195 IPR011009 -
Ssu7g1284 1212 Pfam Protein tyrosine and serine/threonine kinase 934 1195 IPR001245 GO:0004672|GO:0006468
Ssu7g1284 1212 CDD STKc_MAP3K-like 938 1195 - -
Ssu7g1284 1212 Pfam PB1 domain 208 292 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1284 Ssu-Chr7 27971869 27978826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1284 35 340 MAP Kinase Kinase Kinase AT1G16270 41.290 2.27e-44 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ssu7g1284 PK_Tyr_Ser-Thr 6.4e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1284 - - gmx:100810711 2023.05