Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1280 ATGAGAACATCGAGGAAGACCGCTTCAACAAGAGTCCTCAACTCCTTCTGTACAATCCAGTGTACAAGAGGACTCCAGTGCTTGTTCATGCTGGAAAACCTTTATGTGAGTCCATGCTTATTATTGAATACATCGATGAGATACTGGCCTCAAAATCCAGTACTTCAGGCTGATCCCTATGAGAAAGCTCTCACACggttttgggttaaatattCTGATGACctgCTTACTGCGGTAGGAGCACTCTTCAAAGGCAGTAGTGTTGAAGAGCGAAAGAAGGACATAGAGAATATTTGGGAGCATTTCAGAGTTGTTGAGGATCAGTGCCTAGGTAAGCAAAAGAAATTCTTCGGGGGAGACATTATTAACGTTGTGGACTTAGCTTTTGGGTCCATAATCAAATTTCTTACGATCTCGGAAGATATCTTTGAAGTGGACATTCTGGAAGCTGAGAAATTCCCTAGTTTGTATTCATGGTTTAATAACTTTAAGAGTGACCCAGTCATTGCAGAAAACCTACCTAACAAGGAGAAAATGGTAGCTTTTGTTAAATCTCTTAGAGAAAGAACCTTGGCATCTTCGTGA 585 0.3983 MRTSRKTASTRVLNSFCTIQCTRGLQCLFMLENLYVSPCLLLNTSMRYWPQNPVLQADPYEKALTRFWVKYSDDLLTAVGALFKGSSVEERKKDIENIWEHFRVVEDQCLGKQKKFFGGDIINVVDLAFGSIIKFLTISEDIFEVDILEAEKFPSLYSWFNNFKSDPVIAENLPNKEKMVAFVKSLRERTLASS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1280 194 CDD GST_C_Tau 59 184 IPR045074 GO:0004364|GO:0006749
Ssu7g1280 194 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 58 182 IPR010987 -
Ssu7g1280 194 SUPERFAMILY GST C-terminal domain-like 48 189 IPR036282 -
Ssu7g1280 194 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 48 188 - -
Ssu7g1280 194 Pfam Glutathione S-transferase, C-terminal domain 96 166 IPR004046 -
Ssu7g1280 194 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 48 188 IPR045073 -
Ssu7g1280 194 Gene3D - 58 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1280 Ssu-Chr7 27918827 27919963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1280 40 192 Glutathione S-transferase Gene Family AT2G29470 33.333 8.38e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1280 K00799 - gmx:547584 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1280 7 27918827 27919963 Ssu7g1280 7 27918827 27919963 ECH