Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1279 ATGATCATTGTTGAATACATTGATCAGATATGGCCACACAACCCATTGCTTCCTACTGATTCTTATGAGAGAGCTCTGGCTCggttttgggttagatatgCTGATGACATGatttctGCAGATCGGTCACTCGTCACTAGCAGCAATGGTGAAGAGCAGGAGAAGGCCATAGAGAAGATATGGGAGCATCTCAGAGTGGTTGAGGATCAGTGCTTAAGTGATcagaagaaattttttgggGGAGACACTATTAACATTGTGGACATAGCTTTTGGGTCCATAGTCAAATTTCTTTTGGTTATAGAAGGTACTCTTGAAGTGAAGTTCCTGGAAGATGAGAAATTCCCTCACTTGCATTCATGGTATAATAATTTCAAGGATGTTCCAGTTATTAAAGAAAATCTCCCAGACCAGGACAAAACGGTGGCTCTTCTTAagtttttaagagaaaaaattttgGCATCTTCCTAA 471 0.3609 MIIVEYIDQIWPHNPLLPTDSYERALARFWVRYADDMISADRSLVTSSNGEEQEKAIEKIWEHLRVVEDQCLSDQKKFFGGDTINIVDIAFGSIVKFLLVIEGTLEVKFLEDEKFPHLHSWYNNFKDVPVIKENLPDQDKTVALLKFLREKILASS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1279 156 Gene3D - 20 156 - -
Ssu7g1279 156 SUPERFAMILY GST C-terminal domain-like 10 152 IPR036282 -
Ssu7g1279 156 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 150 - -
Ssu7g1279 156 Pfam Glutathione S-transferase, C-terminal domain 50 125 IPR004046 -
Ssu7g1279 156 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 20 143 IPR010987 -
Ssu7g1279 156 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 150 IPR045073 -
Ssu7g1279 156 CDD GST_C_Tau 22 148 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1279 Ssu-Chr7 27915059 27915862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1279 2 142 Glutathione S-transferase Gene Family AT2G29470 37.931 5.80e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1279 K00799 - gmx:547584 233.417