Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1271 ATGTCACATGCACCCGAGACTTCTTCAGCAAAAATGCCAGCTGTTCCTGATGCGGCTTCTGAAAAATATTCTAGAGGCAAAGGTCAAGAAAACCATGAAGTTGATGGTTGTGAGCATTTATCTGCAGAAGAGAAGCTTGCTGCAGAAGAGAGTCTTTCAGTTTATTGCAAGCCTGTAGAGCTCTACAACTATCTTCGGCATCGTGCTATAGAAAACCCATTATTCCTTCAGAGATGTTTGGACTACAGGATAAAGGCTAAGCGGAAGAAGAGGATGCTAGTGACAGTTTCCGTGTTATGGAGTGATGATGAAACTTGGTCTCTGTTTCCTTTGTGTATCTGTGTGGCAAGGCTGGATCCTAACGATGAAGCTGAAGAAGGGGCACAAAAGTACCAGGCTGTTCGGATATTCACATTTCGAGGTTCCTCTAAAATTGATGGGAATGGGAGTACTCAAGTCCAAGCAAACTTTGTGCTTTCTAAACCTGATAAGTTAGCTGAGGAAGCTAAATCTGGCAAAtattttgtcttgatttttGCCTCTGTGGATAACCCAATTTCATTATCTGAAGTCAATGCGAGCCTGATGCCTTGGGATGTGGCTTCTAATGAATCAAGAGGAGGAGAGAACTGCTTATATGGAAAAGTATCTTTGAAAAAACTTTATAAGATTTGGCATCTGTATCCAAGTTTTCCATTGGGACAACGAATCCAGATTCATTATGATGTTCATTTGCTTCCATGTATTTTGACGtattgttttcaaagaaagagcAAGAGCATCTCAATTCAAGGTTCCAGGGATCCTCAAGATGAGTTTTCAAAGAAGGACTTAAAGCAACTTCAAGTCACACTTTTTACTGAAAAATTTGGAGCTAGGGAAAAATCTTCCGACCGTACTCATGCAAGCAGAGAAGTTGCATcgacatcatcatcattgtctcATATCCTTTGGTTGAAAGAAGGAAATGTCTCATTTAATTACAGgtATTACCATAATAAGTTGCGGAGAATGGAAGTTACTGAAGATTTCTCCTGTccattttgtttggttaaatgTGCAACATTCAAGGGTCTAAAATGGCACTTGATATCGTCACacgatttttttaattttgaattttcgCCATCAGAGGATTGTCCATCTGTATATGTGTCCGTGAAAACCAATATTTGGAGACCTGAGATTATTGCAGATGGTGTTGATCCAAGAGTACAAACTTTTATCTTTAGTGCCAAGCGACCTAAGCACGGAGAACTGAAGAATGTATCTCTTGGAAGGGCAAATGATACAGATCCACTGCTCTTAGATCCTGAAATTCTTGCGGGAGATACAGAGCTTTGGGAGAAAGCTGATGGCTCAAATGCAATTATGTTACATTCTGGTCCCGATTATGTCCCACCAATATCTGATCATGATCATGGGACACCTGCAGTGCTACAGGTTGACCAGGAAGGGGTTTCAAATGCAATTATTTTACATCCTGGTCCAGATTGTGTCCCACCAATATCTGAGCATGATCATGGGACTCCTGCAGTGCTCCAGGTTGACCAGGAAGGGGTTTCAAATGCAATTATTTTACATCCTGGTCCAGATTGTGTCCCACCAATATCTGAGCATGATCATGGGACTCCTGCAGTGCTACAGGTTGACCAGGAAGGGGTTTCAAATGCAATTATTTTACATCCTGGTCTAGATTGTGTCCCACCAATATCTGAGCATGATCATGGGACTCCTGCAGTACCACAAGTTGGCAAGAGAAGGAAGTTACCAATTGAGAACCATGACTCACAATCACAAATcTTTGCCCGGTTGAAGAAGCGGAACTTTTATCACTCTCACAAATACCAGgTTTTGGCAATTGAAGAAGTGCTACTGGATGAAGACAGTGAGGATGAAATTAATGAGTACGCTCAAGAGATTGAAGGTCGAAGGAAACTTGCTATTCTTGCTGCGGCCAATGATGAGAGGTGGTTCCTACCTATGTGGAACTCATTTATTAAGGAACATCGTGTGCTGGCCGATGGTCACATTAATTGGGCATATGAAGCTTTCACAAAATATCATTGCGCCAAGCTTGTCCAATACCCCGCAATAGCCAGGTGTTGGAGACTGTTGATGGTCAAACTATCGAACCATGGTCTTCTAGAGGCGCGGACCTTTAATAAATGCAATATTATTCTTGAACAATGCCGGAAGCTGAATTGA 2208 0.4013 MSHAPETSSAKMPAVPDAASEKYSRGKGQENHEVDGCEHLSAEEKLAAEESLSVYCKPVELYNYLRHRAIENPLFLQRCLDYRIKAKRKKRMLVTVSVLWSDDETWSLFPLCICVARLDPNDEAEEGAQKYQAVRIFTFRGSSKIDGNGSTQVQANFVLSKPDKLAEEAKSGKYFVLIFASVDNPISLSEVNASLMPWDVASNESRGGENCLYGKVSLKKLYKIWHLYPSFPLGQRIQIHYDVHLLPCILTYCFQRKSKSISIQGSRDPQDEFSKKDLKQLQVTLFTEKFGAREKSSDRTHASREVASTSSSLSHILWLKEGNVSFNYRYYHNKLRRMEVTEDFSCPFCLVKCATFKGLKWHLISSHDFFNFEFSPSEDCPSVYVSVKTNIWRPEIIADGVDPRVQTFIFSAKRPKHGELKNVSLGRANDTDPLLLDPEILAGDTELWEKADGSNAIMLHSGPDYVPPISDHDHGTPAVLQVDQEGVSNAIILHPGPDCVPPISEHDHGTPAVLQVDQEGVSNAIILHPGPDCVPPISEHDHGTPAVLQVDQEGVSNAIILHPGLDCVPPISEHDHGTPAVPQVGKRRKLPIENHDSQSQIFARLKKRNFYHSHKYQVLAIEEVLLDEDSEDEINEYAQEIEGRRKLAILAAANDERWFLPMWNSFIKEHRVLADGHINWAYEAFTKYHCAKLVQYPAIARCWRLLMVKLSNHGLLEARTFNKCNIILEQCRKLN 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1271 735 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 35 517 - -
Ssu7g1271 735 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 544 733 - -
Ssu7g1271 735 MobiDBLite consensus disorder prediction 1 34 - -
Ssu7g1271 735 Pfam VEFS-Box of polycomb protein 594 726 IPR019135 -
Ssu7g1271 735 PANTHER POLYCOMB GROUP PROTEIN 35 517 - -
Ssu7g1271 735 PANTHER POLYCOMB GROUP PROTEIN 544 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1271 Ssu-Chr7 27786646 27814893 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1271 583 730 C2H2 Transcription Factor Family AT5G51230 48.993 4.80e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1271 - - ccaj:109804991 729.554