Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1268 ATGTTTTCATCTGTGATATGGAATCTCAACATTAGATGGATCTCTATATCTGAGTTgctaaattttcaatatatgatTTCCATTGTAGGTTTGTTGCTTcagaaaatttcatatatttcaagGTTCAGATCAATGTTCGATATTCCTGAGACTTCTTCAGCAAGAATGCGAGCCATTCCTGTTGCTGCAAATGAAACATATTCTAGAAGCACAGATCAACCAAACCATGAAGATGGTTGGGAGCATTTATCTGCAGAAGAGAAGCTTGCTGCGGAAGAGAGTCTTTCAGTTTATTGCAAGCCTGTAGAGCTCTACAACTATCTTCAGCAACGTGCTATAGATAAACCATTGTTCCTTCAGAGATGTTTGGACTACAGGATAAGGGCTAAGCGCAAGAAGAGGATTCTAATGAGAGTTTCGTGGTTATGGAAAGATGATAAAACTCGGTCTCTGTTTCCTTTGTGTATCTGTCTGGCGAGGCTGGATCCTAATAATGGAGCTGAAGGGGCACAAAGGTATCATTTTGTTCGGATATCCACATTTCGAGGTCCCTCTGGAATTGATGGGAATAGGAATACTAAAATCAAAGTAAACTTTATGCTTCCTGAACTTGACAAGTTACATGTGGAAGCTAACTCTGGCAAAtattttgtcttgatttttGCCTCTGTGGAAAGCCCAATTTCATTATCTAGAGTCAATGCAAGCTTAATGCCTTTGGAGATGGCTTCTAATGAATCAAGGGGTGGAGAGAAATGCTTATATGGAAAAGTATCTTTGAAAGATCTTTTGGGACGGAAAACCAAGTTTTGGTCTGATATTGATTTGCTTCCATGTATTTTGATGTATTGTTTACGAAGAAAGAGCAAGAGCATCTCAATTCCAGATTCCAGGGATTCTCAGGTTGAGGTTTGTTCTAGCATCTCAATTCAAGATTCCAGGGATTCTCAGGATGAGGGTGAattaaaacaacttaaaatCTCACATTATGTTGAAGAATTTGGAGCTAGGGAAAACTCTCCCTGCCGAACACATGCAAGCAGAGAAGTAGCATCGATGTCGTCATCATTATCTCATATCCTTTgGTTGAAAGAAGGCAATGTCTCATTTAATTACAGgtATTACAATAATAAGCTGCAGAGAACCGAagTTACTGAAGATTTTTCCTGTGCATTTTGTTTGGTTCGATGTGCAACATACAAGGGCTTAAAATGCCACCTATCATCGTCgcatgacttttttaattttgaattttcgGAGGATTGTCCATCTGTATATGTGTCTGTGACGACTGATATCTGGAGACTAGAGATTATTGCACATGATGTTGATCCAAGAGTACAAACTTTTCTCTATTGTGCCAAGCCGCCTAAGCGCAGAGAACCGAAGAATGTATCTCATGGTAGAGCAGATGATGCAGACCAACAGCTCTTAGATCCAGAAATTCCTACAGGAGATACAGAGCTTTTGGAGAATGCTAATGGGTTAAATGCAGTTGTTTTACATCCTGGTCCAGATTGTGTTCCATCAATATCTGATCATGATAATGGGACACATGCAATGCTACAGGTTGATCATGAAGGggtttcaaatgcaattttacaTTCTGATCCGGATTGTGTCCCATCAATATCTGATCATGATAATGGGACACATGCAATGCTACTAGTTGACCATGAAGGggtttcaaatgcaattttacaTCCTGATCCGGATTGTGTCCCATCAATATCTGATCATGATAATGGGACACATGCAGTGCTACATGTTGACCATGAAGGggtttcaaatgcaattttacaTCCTGATCTGGATTGTGTCCCATCAATATCTGAGCATGATCATGAGACTCCTGCAGTGCCACAAGTTGGCAATAAAGGGAAGTTATCAATTGAGCACTATGACCCAAAAATCGTTGCCCGGTTGAAGAAGCGGAACTTTTGTCACTCTCACAAATACCAGGCTATGGAACTTGAAGAAGCGCTAGTAGATGAAGATAGTGAGGATGAAATTAATGAGGAAGTTCAAGAGATTGAAGATCGAAGGAAACTTGCTATTCTTGATGCGACCGACAATGATAAGCGTTTCCTACCTATGTGGAACTCATTTATTAAGAAACATCGTGTGCTGGCAGATGGTCACATGAATTGGGCATGTGAAGCTTTCACAAAATATCATTGCGCTGAGCTTGCCCAGTCCCCCACATTAGCCTGGCATTGGAGAGTGTTTATGTTCAAACTATTGATTCAAGGTCTTCAAGAGGCACGGACCATTAATAAATGCTGTATTATTCTTGAGCAATACCGGAAGCTGAATTCAGATATATCCCAAAGGCTAAAGAAAATTCGGTTTTAA 2355 0.3792 MFSSVIWNLNIRWISISELLNFQYMISIVGLLLQKISYISRFRSMFDIPETSSARMRAIPVAANETYSRSTDQPNHEDGWEHLSAEEKLAAEESLSVYCKPVELYNYLQQRAIDKPLFLQRCLDYRIRAKRKKRILMRVSWLWKDDKTRSLFPLCICLARLDPNNGAEGAQRYHFVRISTFRGPSGIDGNRNTKIKVNFMLPELDKLHVEANSGKYFVLIFASVESPISLSRVNASLMPLEMASNESRGGEKCLYGKVSLKDLLGRKTKFWSDIDLLPCILMYCLRRKSKSISIPDSRDSQVEVCSSISIQDSRDSQDEGELKQLKISHYVEEFGARENSPCRTHASREVASMSSSLSHILWLKEGNVSFNYRYYNNKLQRTEVTEDFSCAFCLVRCATYKGLKCHLSSSHDFFNFEFSEDCPSVYVSVTTDIWRLEIIAHDVDPRVQTFLYCAKPPKRREPKNVSHGRADDADQQLLDPEIPTGDTELLENANGLNAVVLHPGPDCVPSISDHDNGTHAMLQVDHEGVSNAILHSDPDCVPSISDHDNGTHAMLLVDHEGVSNAILHPDPDCVPSISDHDNGTHAVLHVDHEGVSNAILHPDLDCVPSISEHDHETPAVPQVGNKGKLSIEHYDPKIVARLKKRNFCHSHKYQAMELEEALVDEDSEDEINEEVQEIEDRRKLAILDATDNDKRFLPMWNSFIKKHRVLADGHMNWACEAFTKYHCAELAQSPTLAWHWRVFMFKLLIQGLQEARTINKCCIILEQYRKLNSDISQRLKKIRF 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1268 784 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 76 775 - -
Ssu7g1268 784 MobiDBLite consensus disorder prediction 458 484 - -
Ssu7g1268 784 MobiDBLite consensus disorder prediction 458 476 - -
Ssu7g1268 784 Pfam VEFS-Box of polycomb protein 629 762 IPR019135 -
Ssu7g1268 784 PANTHER POLYCOMB GROUP PROTEIN 76 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1268 Ssu-Chr7 27723370 27756880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1268 622 767 C2H2 Transcription Factor Family AT5G51230 49.660 1.36e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1268 - - gmx:100814462 754.207