Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g1264 | ATGGCCACATCAGAAGAAACTTCAACTTTAAAACTGTTGCACCAGTATCTCTTGGGGGATATTTCAGAGGGGGATATTTCAGAACCCTTTCTCACCAATCTAATTCCTGTAAAACTTGAAGACCCCTCATCAGAACTTGATTTGGGTTCAAGCTTCTCAGAACAAAGCAGCTTCTGCACGTTTCTAGAATGCTTCGATTTTGAAGCAGACACAGAAGTGGCAGGTCTCACATCTCACAAGGTCCAAAACTCCATTGCAGCAAGTCAACCCCAGAAGTTGGATTTGCCAGAAGAACCGATGGTGTCAGGGAAAAAGGAAGAAGCAACATGTTATGAGGCAAGGCGTTACAGAGGAGTGAGGAGAAGGCCATGGGGGAAGTTTGCTGCAGAGATCCGTGACCCCAGAAAGAAAGGGAGCAGGGTGTGGCTAGGCACATTTGACAGTGAGGTTGATGCTGCTAAGGCTTATGATTGTGCTGCATTTAGGATAAGAGGTCAGAAAGCCGTGTTGAATTTCCCTCTGGAGGCTGGAAAATCTCACCCAGACCCCAACAGTTGTGGCAAGAAAAGGAGAACAGAGTACACAACACCTGCCACAAGTTCAAGTCATGTTATGTCATGA | 621 | 0.4622 | MATSEETSTLKLLHQYLLGDISEGDISEPFLTNLIPVKLEDPSSELDLGSSFSEQSSFCTFLECFDFEADTEVAGLTSHKVQNSIAASQPQKLDLPEEPMVSGKKEEATCYEARRYRGVRRRPWGKFAAEIRDPRKKGSRVWLGTFDSEVDAAKAYDCAAFRIRGQKAVLNFPLEAGKSHPDPNSCGKKRRTEYTTPATSSSHVMS | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g1264 | 206 | CDD | AP2 | 123 | 173 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | PRINTS | Ethylene responsive element binding protein signature | 116 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | PRINTS | Ethylene responsive element binding protein signature | 155 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | ProSiteProfiles | AP2/ERF domain profile. | 115 | 173 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | MobiDBLite | consensus disorder prediction | 174 | 206 | - | - | |
Ssu7g1264 | 206 | Gene3D | AP2/ERF domain | 114 | 175 | IPR036955 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | Pfam | AP2 domain | 115 | 165 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 | 5 | 193 | - | - | |
Ssu7g1264 | 206 | SMART | rav1_2 | 115 | 179 | IPR001471 | GO:0003700|GO:0006355 | |
Ssu7g1264 | 206 | MobiDBLite | consensus disorder prediction | 190 | 206 | - | - | |
Ssu7g1264 | 206 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 5 | 193 | - | - | |
Ssu7g1264 | 206 | SUPERFAMILY | DNA-binding domain | 115 | 175 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g1264 | Ssu-Chr7 | 27675461 | 27676081 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g1264 | 1 | 193 | AP2-EREBP Transcription Factor Family | AT5G07580 | 41.000 | 5.47e-40 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Ssu7g1264 | AP2 | 2.9e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g1264 | - | - | gmx:100306125 | 319.316 |