Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1255 ATGATAGAGTACAGATTTTCCACATCAGTACTTTTGTTCCATGATGGTTTGAAAGGTCAAAATTCAAGGAAAATCATGAGTTCATCTAACCAGTTGAACCAAGGCAGCAGATTTCTTGCAAACAAGCCAAGGAATGAGGTTGATGTGCAGGAAGAAAGATTCAGAATTGATGGAAACACAACATTTGTGATGAACTATGGACGTTGGACGGAAAAACATAACAGACTTATTTCTGAAATACGGAGTGCTTTAAATGATCAAAACCACCAAGTTCTTGATGACAAACTACTGTTTCTTATAGACATAGTCTTGAAGCACTATTTTGAACTCTTCGAGATGAAAACTAGTGCTGCAAATTTAGATGTCTTCAATGTTGCTTCTGCTATTTGGTGCACAACAGCTGAACGCAATTTGTGGTGGATTGGAGGTTTTCGCCCTTCTGATCTTCTTCAGGTTATTCTGCCTCAACTTCAACATTCGTGTTCCCAGCAACAAGTttctgatatttttaattttgtacaatCGTGTCAACAAGCAGAAGTTGCTCTAGCACAAGGCATGGAAAAACTCCAGCAAATCCTTGATAGAGCAGCAGCAGCAGGTGACAGAGGATTAAAACTGAAGTGTGTCCCACAACAAATGAGATTTTTAAAGCAGGCGGATCATGTTCGCCAGGAATTCTTGTATCAATTATCTCGTCTCCTCACAATTTCTCAGCATGCTGAATTCTTGCTTGCCTTGGGGGAACGCCTCTATAACCCGCAGCCTTGGAGCTCACTTTGA 783 0.3972 MIEYRFSTSVLLFHDGLKGQNSRKIMSSSNQLNQGSRFLANKPRNEVDVQEERFRIDGNTTFVMNYGRWTEKHNRLISEIRSALNDQNHQVLDDKLLFLIDIVLKHYFELFEMKTSAANLDVFNVASAIWCTTAERNLWWIGGFRPSDLLQVILPQLQHSCSQQQVSDIFNFVQSCQQAEVALAQGMEKLQQILDRAAAAGDRGLKLKCVPQQMRFLKQADHVRQEFLYQLSRLLTISQHAEFLLALGERLYNPQPWSSL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1255 260 Pfam Seed dormancy control 77 154 IPR025422 GO:0006351|GO:0043565
Ssu7g1255 260 PANTHER TRANSCRIPTION FACTOR TGA9 26 260 - -
Ssu7g1255 260 ProSiteProfiles DOG1 domain profile. 59 260 IPR025422 GO:0006351|GO:0043565
Ssu7g1255 260 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 26 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1255 Ssu-Chr7 27523642 27528054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1255 58 249 Calmodulin-binding Proteins AT5G10030 48.259 1.09e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1255 K14431 - gmx:100527435 392.504