Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1244 ATGATGGGAATGGCAGTGGCTGGTGTCGATTTGCTGACTGAAAAAGCAGCGATGATGAGAGAGTCTCTGCAGAAGAGCCAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCCTTCGACCACCGTCTGTCAGCCCTCGAGACCGCCATGCGTCCAACTCAGGTTAGAACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGTCTGCAGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGATCTGGAAAACTATCTTGAAGCAATTGATAATTTGAGAAACAACATTCAGTTTTTTGGCAGTAAGAAGGGTTTTAAGAGTAGtgatggcattgtcgtccatgCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGATGAGTTTAAGCAGTTATTATCATCTTACAGCAAACCGGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCAAATTCAATGCGACCTTCATCAGGATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCCTTCTAATCACCATGCTGAGCATCACAACAATAATGCCGATGCTGTTGTATACACACCTCCCGCTCTTATACCACCAAGATTTTTGCCACTACTACATGATTTAGCTCAGCATATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGGGATGCCCGTTCAAATGTATTGGAAGAGAGCCTCCAAAAGCTTGGAGTTGAGAAACTGAACAAAGATGATGTTCAAAAGCTGCAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTAGTGAACAATGCTTTGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAGAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTATTGGACATGTATGAAATAATGCAAGAGCTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGGAATAAAAGAAGCTGCAACTAGTTTGACAAAACGACTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACAGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAAGTGGCAATGATTCTTCACAGCTAGCATCTGTAACAGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACATTGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGgtCTGAAGCCAAGGATTTACTAGGAGATGATTGGGTACAACGACATAGGAGAATTGTGCAGCAGCACGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTGGTAGTGCTGGTGGTGATGGTGGAACTGGAAGCAGTAGTGGTGCTTCAAGAGCAATGGTTAAAGACAGGTTTAAGACATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACTGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCGTTTGTCAAACGATATGGGCCTCTAGTGGAGAGTGGAAAGAATCCTCAGAAGTacatcaaatacacaccagaagATCTAGACCGAATGTTGGGCGAgttttttgaaggaaaaaacaTGAGTGAAACCAAGCGGTAA 1965 0.4066 MMGMAVAGVDLLTEKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQVRTHSIRKAHENIDRTLKSAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDNLRNNIQFFGSKKGFKSSDGIVVHANNLLAKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDPSGKNPSNHHAEHHNNNADAVVYTPPALIPPRFLPLLHDLAQHMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIARSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSGIKEAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFESGNDSSQLASVTVRIMQALQTNLDGKSKQYKDIALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGSAGGDGGTGSSSGASRAMVKDRFKTFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRYGPLVESGKNPQKYIKYTPEDLDRMLGEFFEGKNMSETKR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1244 654 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 650 IPR004140 GO:0000145|GO:0006887
Ssu7g1244 654 MobiDBLite consensus disorder prediction 541 560 - -
Ssu7g1244 654 Gene3D Exocyst complex component Exo70 187 654 - -
Ssu7g1244 654 Gene3D Exocyst complex component Exo70 76 180 - -
Ssu7g1244 654 Coils Coil 100 120 - -
Ssu7g1244 654 MobiDBLite consensus disorder prediction 166 197 - -
Ssu7g1244 654 Pfam Exo70 exocyst complex subunit 280 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ssu7g1244 654 SUPERFAMILY Cullin repeat-like 78 645 IPR016159 -
Ssu7g1244 654 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1244 Ssu-Chr7 27378641 27394536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1244 4 654 EXO70 exocyst subunit family AT5G03540 74.963 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1244 K07195 - gmx:100813987 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1244 7 27378641 27394536 Ssu7g1244 7 27378641 27394536 ECH