Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu7g1201 | ATGACACTCAAGGCTGCTTCAGGTTCTATACCGAGTGCAGACACAAGTAGTGCTGATGAGAAGGAGGAAAAGTCTGAGACATATAGTCATAACATGACAGAAGCCATGGGTGCTGTTTTGACTTATAGGCATGAATTAGGAATGAACTACAACTTCATCCGTCCAGACTTGATTGTGGGATCTTGCCTACAgACTCCTGAAGATGTTGACAAGTTGCACAGAATTGGAGTGAAAACTATATTTTGCTTACAACAAGATCCAGACCTTGAATATTTTGGAGTTGATATTAATGCTATACGAGAATATGCCAAGACATGCAATGACATTCACCACTTGCGTGCTGAGATAAGGGACTTTGATGCATTTGATCTACGGATGCGGCTTCCAGCTGTAGTTAGCAAATTATACAAGGCAATAAACTCCAATGGAGGTGTAACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGTTGGCTTATATGTTCTGGGTTCTGGGTTATAAACTTAATGAGGCTCATACACTACTTCAGAGCAAAAGGGCATGCTTTCCAAAACTGGATGCCATTAAAAGTGCATCGGCTGATATTCTTACAGGCCTCAGTAAGAAGCCTGTCACTTTGTCATGGGAAGACAGCAATTGCTCAACCGTTGAAATTTCAGGACTTGATATTGGATGGGGGCAGAGAATACCCCTAGATTTTGATGACAAAGAGGGTTTGTGGTTTCTCAAGAGGGAATTGCCTGAAGGACTCTATGAGTACAAGTACATTGTTGATGGGGAATGGATATGCAATAAAGATGAGCTTGTAACCTCTCCTAACAAAGATGGCCATGTCAACAATTTTATTCAAATCCTTGATACAAGCAGTGTTCGGGCCTCCCTTTGGGAGAGATTGACTGGTGATGATCCTGATCTCACAAAGGAAGAACGACTGACAATAAAGGAGTTTCTTGAAGCATGTCCTGATGAGTATCAGTGA | 993 | 0.4189 | MTLKAASGSIPSADTSSADEKEEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLHRIGVKTIFCLQQDPDLEYFGVDINAIREYAKTCNDIHHLRAEIRDFDAFDLRMRLPAVVSKLYKAINSNGGVTYIHCTAGLGRAPAVALAYMFWVLGYKLNEAHTLLQSKRACFPKLDAIKSASADILTGLSKKPVTLSWEDSNCSTVEISGLDIGWGQRIPLDFDDKEGLWFLKRELPEGLYEYKYIVDGEWICNKDELVTSPNKDGHVNNFIQILDTSSVRASLWERLTGDDPDLTKEERLTIKEFLEACPDEYQ | 330 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu7g1201 | 330 | CDD | DSP_laforin-like | 48 | 195 | IPR045204 | GO:0019203|GO:0046838 | |
Ssu7g1201 | 330 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 49 | 206 | IPR020422 | GO:0006470|GO:0008138 | |
Ssu7g1201 | 330 | Gene3D | Protein tyrosine phosphatase superfamily | 42 | 321 | IPR029021 | - | |
Ssu7g1201 | 330 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Ssu7g1201 | 330 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 46 | 191 | IPR029021 | - | |
Ssu7g1201 | 330 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Ssu7g1201 | 330 | CDD | E_set_AMPKbeta_like_N | 208 | 289 | - | - | |
Ssu7g1201 | 330 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 208 | 291 | IPR032640 | - | |
Ssu7g1201 | 330 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 126 | 184 | IPR000387 | GO:0016311|GO:0016791 | |
Ssu7g1201 | 330 | Pfam | Dual specificity phosphatase, catalytic domain | 92 | 187 | IPR000340 | GO:0008138|GO:0016311 | |
Ssu7g1201 | 330 | SMART | dsp_5 | 49 | 199 | IPR020422 | GO:0006470|GO:0008138 | |
Ssu7g1201 | 330 | PANTHER | PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC | 2 | 328 | IPR030079 | GO:0005982|GO:0007623|GO:0019203 | |
Ssu7g1201 | 330 | Gene3D | Immunoglobulins | 204 | 293 | IPR013783 | - | |
Ssu7g1201 | 330 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 2 | 328 | - | - | |
Ssu7g1201 | 330 | SUPERFAMILY | E set domains | 207 | 289 | IPR014756 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu7g1201 | Ssu-Chr7 | 26591657 | 26604616 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu7g1201 | 48 | 327 | Protein tyrosine phosphatase (PTP) family | AT3G52180 | 69.751 | 3.55e-149 | 419 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu7g1201 | - | - | gmx:100786287 | 621.698 |