Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1186 ATGGCCACTGAAGATTACCCCCTCATCGACTCTCCCTCCCACGCGCAGCCTCACCTCCACGCGCCCACGCGCCACCACTtcccctcctcctcctcctcaagTCCCACCACTCTCCCCGCCGCCGATTCCGCCACCGCCGACTACTACCCCCACACCTCCTTCTCCGACAACTCCGCCGGCCCCGCGAAATCCGTCCAAACCCCCAATTCCAAGgacgccgccgccgccgccggcAGCCCCTACTACTACAACAAGAAGCTCAAGTCCGCCGCCGGTCCGGATCCGGCGACCGACGCGGCGTTCCGCTGCGGCGCCGGGGATTACCGGAAGGACCGCGAGGAATGGAGCGACACGGCGATCGCGTGTCTTTTGGAGGAGTACATGGAGAGGTTCAACCAGCTGAACCGCGGCAACCTCCGCGGCCGTGACTGGGAGGAGGTGGCAGAGGCGGTGGGGGAGCGGTGCGGCGGCGGAGAGGGGAAGCATCACAAGAGCGTGGAGCAGTGTAAGAATAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTTCAGAGGATTGGGAGTGGTGGCATTGCCACTAGTCACTGGCATTGGTTTAAGAAGATTGAAGCTATTGTTGGCAACTCTCTCACTGTCAAAACTCTTTCTGATGATGACAAGGCTGATAGTagtgctggtgctggtgctcATTCTTCTTCCATGGCTAGACAAGCCAAGAACAGATATGCACCTAGCAATGCTGCGGTGGCAAACAATCTCAAAACGAAACCAGCTTCAAATCTAAAATGGCATAgagttttgtttaaaattagtgGCTCTGCTTTGGCTGGAAACTGCCAGAATATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTGGAGGTGGCTATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAGATGCATGGGTGTCTGCTACCGGCTTGGATAGACCTACAGCATATCAAATAGGTATGATGGCAACAGTTATGAATTCTATTTTGCTTCAATCTGCTTTGGAGAAGCTGGGTGTTCAGGCACGTGTTCAGAGTGCATTCTCAATGCCAGAGGTTGCTGAACCATATAACAGGCAACGAGCTATTAGACATCTTGAGAAAGGAAGGGTTGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCACTCTTTACCACCGACACAGCAGCAGCTCTCAGAGCTTCCGAGCtTAATGCTGATGCGGTTCTGAAAGGTACTAATGTGAATGGCGTCTTTGACTGCCATACCCGTAATGATAATGCAACACTTGATCACATTTCCTTTAGGGAAGTTGTTTCTAGGGGCATCACCTCCATGGATATGATGGCACTGGCATATTGTGAAGAGAATGGAATACCTGGTCGGTATTTTCTCACTGTTTTCATTCAATGTAATCATccattaaaacctttttttctgAGGTATTCGTTCTCTCCAGTTGTAGTCTTCAACATGCTTGAACCAGGGAATGTTTCAAGAGCATTATGTGGAGATCAAGTTGGCACTTTGATCGATCAAATGGGTAGAGTGGAGCATCAGCTTCCTAGTTAA 1602 0.4775 MATEDYPLIDSPSHAQPHLHAPTRHHFPSSSSSSPTTLPAADSATADYYPHTSFSDNSAGPAKSVQTPNSKDAAAAAGSPYYYNKKLKSAAGPDPATDAAFRCGAGDYRKDREEWSDTAIACLLEEYMERFNQLNRGNLRGRDWEEVAEAVGERCGGGEGKHHKSVEQCKNKIDNLKKRYKVELQRIGSGGIATSHWHWFKKIEAIVGNSLTVKTLSDDDKADSSAGAGAHSSSMARQAKNRYAPSNAAVANNLKTKPASNLKWHRVLFKISGSALAGNCQNIDPKVAMQIAREVATACRLGVEVAIVVGGRNFFCGDAWVSATGLDRPTAYQIGMMATVMNSILLQSALEKLGVQARVQSAFSMPEVAEPYNRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADAVLKGTNVNGVFDCHTRNDNATLDHISFREVVSRGITSMDMMALAYCEENGIPGRYFLTVFIQCNHPLKPFFLRYSFSPVVVFNMLEPGNVSRALCGDQVGTLIDQMGRVEHQLPS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1186 533 MobiDBLite consensus disorder prediction 1 72 - -
Ssu7g1186 533 Gene3D - 115 182 - -
Ssu7g1186 533 PANTHER KINASE, PUTATIVE-RELATED 1 470 - -
Ssu7g1186 533 Coils Coil 166 186 - -
Ssu7g1186 533 MobiDBLite consensus disorder prediction 222 241 - -
Ssu7g1186 533 PANTHER URIDYLATE KINASE 495 527 - -
Ssu7g1186 533 MobiDBLite consensus disorder prediction 48 72 - -
Ssu7g1186 533 SMART sant 111 179 IPR001005 -
Ssu7g1186 533 MobiDBLite consensus disorder prediction 227 241 - -
Ssu7g1186 533 CDD AAK_UMPK-PyrH-Ec 266 522 IPR015963 GO:0005737|GO:0006221|GO:0033862
Ssu7g1186 533 PANTHER URIDYLATE KINASE 1 470 - -
Ssu7g1186 533 SUPERFAMILY Carbamate kinase-like 263 521 IPR036393 -
Ssu7g1186 533 PANTHER KINASE, PUTATIVE-RELATED 495 527 - -
Ssu7g1186 533 MobiDBLite consensus disorder prediction 25 41 - -
Ssu7g1186 533 Pfam Myb/SANT-like DNA-binding domain 112 206 IPR044822 -
Ssu7g1186 533 Gene3D - 258 522 IPR036393 -
Ssu7g1186 533 Hamap Uridylate kinase [pyrH]. 262 522 IPR015963 GO:0005737|GO:0006221|GO:0033862
Ssu7g1186 533 Pfam Amino acid kinase family 266 470 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1186 Ssu-Chr7 26208966 26212041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1186 115 215 Trihelix Transcription Factor Family AT3G14180 42.574 6.51e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ssu7g1186 AA_kinase 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1186 - - gmx:100791426 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1186 7 26208966 26212041 Ssu7g1186 7 26208966 26212041 ECH