Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1166 ATGCACTCCTCCGCCGAGGGCGACTCCGACAACTCCGCCACCACCGGCACGGAGTGGACGTTGTCCGTCAAGTCCCACGCACCCTCCTCCGACCCCAGCTGGGACGCCATACAGCGCGGCGGCACCACCCGGGGCCTGGGCGACCTCCGCTTCGTGCAGCGCCTCGGCAGCGGCGACATCGGAAGCGTGTACCTCGTGGAGCTCAAGGGCTCCAACGGGTGCCTCTTTGCGGCGAAGGTCATGGACAAGAAGGAACTCGTGGCGAGGAACAAAGACACAAGAGCAAAGGTTGAGAGAGAGATACTGCAAGTGGTGGATCACCCCTTTTTGCCTACCCTCTATGCATCCTTCGACTCCCCACGCTGGTCCTGCCTCCTAACCCAGTTTTGCCCCGGCGGCGATCTCCACGTCCTCCGCCAGCGCCAGCCCGATAAACGCTTCCACCACGCCGCCGTTAGGTTCTATGCATCTGAAGTGGTTGTTGCCTTGGAGTACCTACACATGATGGGGATAATATACCGTGATTTGAAGCCCGAAAACGTGCTCATAAGATCAGACGGCCATATAATGCTCACAGACTTTGATCTCTCACTAAAAGGTGACGATAGCTCATCAACGGCTCAGATCGTCTTTGATCAAGATCCACCCACCAACACCTGTTCTAACGAACATTCCAAGAACCAATGCGCATCCGCCATGTCATCATGCATGTTGCCCAATTGCATCGTGCCATCTGTCCCATGCTTCCACCCAAAACGCGGTCGTAACAAGAGGTCTTCTCGTTGTGGGTCCCTCGAGATCATAGCCGAGCCAATAGAAATTCGATCAATGTCGTTCGTTGGGACCCACGAGTACTTGGCGCCAGAAGTAATTTCGGGGGAGGGTCACGGTAACGCCGTTGATTGGTGGACATTGGGAGTGTTCATTTTTGAACTGTTCTATGGGATCACACCTTTCAAAGGGCTTGAGCATGAGCTAACCCTAGCCAACATAGTGGCTCGTGCCCTTGAGTTCCCTAAGGAGCCCATGATCCCTGGACCAGCCAGGGATTTGATCACACAACTTTTGGTCAAGGACTCAACAATGAGACTAGGGTCTACAATGGGTGCCGTGGCAATTAAGCACCATCCCTTTTTCAATGGGGTTAATTGGGCATTGTTGAGGTGTGCTACCCCTCCATACATCCCTTCATCAGAAAAGTGCAAGGAGTTGGTTCGAGTCTATAATTGCACAAACAATGCTATAGACTTCTACTAG 1257 0.537 MHSSAEGDSDNSATTGTEWTLSVKSHAPSSDPSWDAIQRGGTTRGLGDLRFVQRLGSGDIGSVYLVELKGSNGCLFAAKVMDKKELVARNKDTRAKVEREILQVVDHPFLPTLYASFDSPRWSCLLTQFCPGGDLHVLRQRQPDKRFHHAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHIMLTDFDLSLKGDDSSSTAQIVFDQDPPTNTCSNEHSKNQCASAMSSCMLPNCIVPSVPCFHPKRGRNKRSSRCGSLEIIAEPIEIRSMSFVGTHEYLAPEVISGEGHGNAVDWWTLGVFIFELFYGITPFKGLEHELTLANIVARALEFPKEPMIPGPARDLITQLLVKDSTMRLGSTMGAVAIKHHPFFNGVNWALLRCATPPYIPSSEKCKELVRVYNCTNNAIDFY 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1166 418 ProSiteProfiles Protein kinase domain profile. 49 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1166 418 PANTHER FLIPPASE KINASE 1-RELATED 11 418 - -
Ssu7g1166 418 CDD STKc_phototropin_like 48 396 - -
Ssu7g1166 418 SUPERFAMILY Protein kinase-like (PK-like) 31 397 IPR011009 -
Ssu7g1166 418 SMART serkin_6 49 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1166 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Ssu7g1166 418 Gene3D Transferase(Phosphotransferase) domain 1 134 210 - -
Ssu7g1166 418 Gene3D Transferase(Phosphotransferase) domain 1 275 397 - -
Ssu7g1166 418 Gene3D Phosphorylase Kinase; domain 1 48 133 - -
Ssu7g1166 418 Pfam Protein kinase domain 51 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1166 418 Pfam Protein kinase domain 276 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1166 418 PANTHER PROTEIN KINASE G11A-LIKE 11 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1166 Ssu-Chr7 25796551 25799350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1166 51 418 AGC Kinase Gene Family AT3G44610 63.613 6.85e-179 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu7g1166 Pkinase 2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1166 K08286 - gmx:100786154 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1166 7 25796551 25799350 Ssu7g1166 7 25796551 25799350 ECH