Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1103 ATGAATAACTCTGTTTCAGACAACAGTTTTATCATTGAGagtgatgaagaagatgaggaGAAGGATTTGAACAAAGGTGGAGGTGATGGTAACGATTCTGACTCTTCCAATTACTCAAATGAAAACCCTCCACAGCGAAGGCCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATATAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACACCCTCATTGTCAAGACTAAGCAGTTCCTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAACACTTCCGTCAGTGACAAAGCCTCTTATACAAGCAACAGAAGATGAGCAGCATCAGAGACGTAGTTCTCATACTTTGCTTCCTCCTCTTCCTTCTAGAAGGTCCTCTTTGATTAAGAAGGATTCCAAGGTTGCTCATGAAGTTCCCCCTCACCACTGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGTTCTTTGTGGCGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGCTTGGGCTTTCTATCTTGTtcatttttgcaattatttcattttatactgGACTTCTCTTGCGTTCCTGCTTGGACAGTGAGCCTGAGCTTGAGACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCCATTTCAATAGTATTGTACGTGGAATTATACGCTTGTTgcattgaatatataattttggagGGCGACAACTTGTCTTCCTTATTTCCAAGTGCGCACTTGAATTTGGGTGGAATTGAATTGAATTCACATACTCTCTTTGCTGTGGTTACTGCCTTGGCTGTTCTTCCTACAGTTTGGCTCCGTGACCTGAGCATTCTCAGTTACATCTCCGCTGgtggagttgttgcatcaattTTAGTGGTTCTCTGCTTGTTGTGGGTTGGCATAGAGGACGTAGGCTTTCATAGCAAAGGGACCACACTCAATCTTGCAACTCTTCCTGTTGCTGTGGGTCTTTATGGGTACTGCTACTCTGGACATGCTGTGTTCCCAAACATTTATATATCCATggcaaatccaaaccaattccCTGGAGTGCTCTTAGCATGTTTTGGTGTGTGTACCGTATTGTATGCTGGAGCTGCGGTTATTGGATACACAATGTTTGGAGAAGCTATACTCTCTCAGTTCACTCTTAACATGCCTCAAGAATTGGTAGCCACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTGGAGGAGTTGATACCATCAAACCATGCCAAGTCCTATTTATATTCCATCTTCATCAGAACAGGGCTGGTACTTTCTACCCTGGTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTGGTGATGTCATTGATTGGCTCACTACTCACAATGCTTGTTACTTTGATACTACCCTGTGCTTGCTTCCTAAGAATCTTGCGGGGGAAAGTGACACGAATACAGACAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTGTGTTCTGCTTTTGGAACATACTCGGCCCTCGCCGAAATTGTGAAGAGTTTGAGGGGATGA 1632 0.4112 MNNSVSDNSFIIESDEEDEEKDLNKGGGDGNDSDSSNYSNENPPQRRPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPETLPSVTKPLIQATEDEQHQRRSSHTLLPPLPSRRSSLIKKDSKVAHEVPPHHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILFIFAIISFYTGLLLRSCLDSEPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPSAHLNLGGIELNSHTLFAVVTALAVLPTVWLRDLSILSYISAGGVVASILVVLCLLWVGIEDVGFHSKGTTLNLATLPVAVGLYGYCYSGHAVFPNIYISMANPNQFPGVLLACFGVCTVLYAGAAVIGYTMFGEAILSQFTLNMPQELVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHAKSYLYSIFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKVTRIQTALCITIITVGVVCSAFGTYSALAEIVKSLRG 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1103 543 Pfam Transmembrane amino acid transporter protein 154 532 IPR013057 -
Ssu7g1103 543 MobiDBLite consensus disorder prediction 29 53 - -
Ssu7g1103 543 PANTHER OS05G0424000 PROTEIN-RELATED 27 540 - -
Ssu7g1103 543 MobiDBLite consensus disorder prediction 114 135 - -
Ssu7g1103 543 MobiDBLite consensus disorder prediction 1 53 - -
Ssu7g1103 543 PANTHER AMINO ACID TRANSPORTER AVT1B 27 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1103 Ssu-Chr7 24413913 24424396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1103 1 476 Amino Acid or Auxin Permease AAAP Family AT2G39130 70.041 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1103 K15015 - gmx:100775840 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1103 7 24413913 24424396 Ssu7g1103 7 24413913 24424396 ECH