Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1097 ATGTGCAGGTCCAAAAGGAGCACCAGCGCGGTAGAACCCAGAACCCGAAGAAACACAAACACAATGACAAACACGAACACGAACTCCCCTCAGCCTCAGCGAACACGAACCCTAACATCGTCATCGTCGAACTGCGAAACCTCCACGAGCGACGTCCCCATCACGGAATCGAGAAGCTACGTGTACGACAACAACAGGGAATGGTCGAAAACGTCTTCCATCTCGAGCCACGCCTCGCTCTCGAGCCTCAAAGACTCGCTCCCGGAAAACCCTAACATCTACCACTTCTCCGAGATCTCCGCCGCCACCGCCAAGTTCTCCGCGCCGcgcctctcctcctcctcctggCGCTGCTCCATCCGCGACCGCGACGTCGTCGTCTCACGCCGCAACTTCCGCCGCCCGATCGACCTCCCGGAGCTCAGCCGCCGCCTCGCCGTCATCTGCCGGAGCCACCACAGCAGCCTCGTCAAACTCCTCGGCGCCTCCGTCTCCGGCGCCGCCATCTTCCTCGTCTACGAGTTCGTCCCCGGCGCCAGCCTCGCCGACTGCCTCCGCAACCGCCGGAACCCTAGCTTCACCGATCTCAACACGTGGATCTCGCGGATGCAGATCGCGTCCGACGTGGCGCACGGCCTCGACTACATCCACAATTTCTCCGGTTCCGATTCCGACTCGGGATTCGGTTTCGTTCACAATCACATCAAGAGCTCCAGCATTGTCGTAACGGAGGACAATCTGCGCGCCAAAATCTGCCACTTCGGCGCGTCGGATCTCTGCGGCGAGGCCGTCGCCGGCGCCGGAGAGACTTCCGGCGGCCGGACGGCGAAGCTCGAGGGGACGAGAGGCTACATGGCGCCGGAATTTCAGGTCACCGGCGTCGCGACGAAGAAGACCGACGTGTACGCGTTCGGAGTGGTGGTTTTGGAGCTGCTTAGCGGGGAGGAGGCGTTGAGATTCGAATTCGACGACGAGGGCGGGTATCGGAGGACGAGCGTGGTGGAGACGGCGAGGGAGGCGGCGGCGGAGGAGAACGGCGGCGTGAGGAAGTGGGTGGATAGGAGGCTGAGGGATTCGTTTCCGGTCAAAGTGGCGGCGAGAATGATTCGGGTCGGGTTGGAGTGTGTCGGGGATGACCCGAACGCGAGGCCGGATATGGGTCGGGTTTCGAATGAGGTGTCCAAGTTGTATTTGGAATCGAAAGAGTGGGATGAGAAAATGGGAACTGATATTGACTTGTCGGTCTCGTTGGCCCCACGATGA 1263 0.601 MCRSKRSTSAVEPRTRRNTNTMTNTNTNSPQPQRTRTLTSSSSNCETSTSDVPITESRSYVYDNNREWSKTSSISSHASLSSLKDSLPENPNIYHFSEISAATAKFSAPRLSSSSWRCSIRDRDVVVSRRNFRRPIDLPELSRRLAVICRSHHSSLVKLLGASVSGAAIFLVYEFVPGASLADCLRNRRNPSFTDLNTWISRMQIASDVAHGLDYIHNFSGSDSDSGFGFVHNHIKSSSIVVTEDNLRAKICHFGASDLCGEAVAGAGETSGGRTAKLEGTRGYMAPEFQVTGVATKKTDVYAFGVVVLELLSGEEALRFEFDDEGGYRRTSVVETAREAAAEENGGVRKWVDRRLRDSFPVKVAARMIRVGLECVGDDPNARPDMGRVSNEVSKLYLESKEWDEKMGTDIDLSVSLAPR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1097 420 MobiDBLite consensus disorder prediction 13 52 - -
Ssu7g1097 420 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Ssu7g1097 420 PANTHER OS09G0572100 PROTEIN 1 420 - -
Ssu7g1097 420 MobiDBLite consensus disorder prediction 1 52 - -
Ssu7g1097 420 Gene3D Transferase(Phosphotransferase) domain 1 177 415 - -
Ssu7g1097 420 ProSiteProfiles Protein kinase domain profile. 105 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g1097 420 Pfam Protein tyrosine and serine/threonine kinase 139 391 IPR001245 GO:0004672|GO:0006468
Ssu7g1097 420 PANTHER OS09G0572100 PROTEIN 1 420 - -
Ssu7g1097 420 SUPERFAMILY Protein kinase-like (PK-like) 130 393 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1097 Ssu-Chr7 24354516 24355778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1097 89 407 Receptor kinase-like Gene Family AT1G51940 33.939 7.62e-47 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ssu7g1097 PK_Tyr_Ser-Thr 4.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1097 - - gmx:100820374 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1097 7 24354516 24355778 Ssu7g1097 7 24354516 24355778 ECH