Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1064 ATGGCGTATATCTACAAGGCTAAGGTGAAAAAAGAATGGAAGCCATTACCGCTGCATATAGGGCAAGGTTATAAGGCTCACGGCAACAGTGGTATTGTTTGTGCAAAATTCAAGTCAAACCTTCCACCCAGATCAATGATAGTGGTTTCCTTGAGCATTAATGACCTTTAA 171 0.4094 MAYIYKAKVKKEWKPLPLHIGQGYKAHGNSGIVCAKFKSNLPPRSMIVVSLSINDL 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1064 56 SUPERFAMILY Translation proteins 7 46 IPR009000 -
Ssu7g1064 56 Pfam Ribosomal protein L35Ae 1 46 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ssu7g1064 56 Gene3D translation elongation factor selb, chain A, domain 4 1 53 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1064 Ssu-Chr7 23355390 23358774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1064 1 46 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 58.696 4.08e-11 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1064 K02917 - tcc:18597616 59.6918