Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1050 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAGTCGCTAGGGTCCGTCGCCAGATGGAGGGATTCCTCGCACCACCGGGACTTCAACCGCTGGGGATCCGCCGAGTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAAGAATCTGGTCATGGGTATGCGATTTCTCGGTCCAGCAGCGACAAGATGCTGGAGGAAGATATTCGGCCGTCGATTTCACGGGGTGATGGGAAGTATGGCAGGAGCAGTAGGGAAAATAGAGGAGGAGGACCCTTTGGCCAGAGAGATTGGAGAGGGCATTTGTGGGAACCCGGCAATGGTTCTGTAAATTTGCCCAGGAGGCCGCAGGATGTGAACAATGACCAGAGGTCGGTAGATGATGCCCTAGCATATTCCTCTCATCCGCATTCTGATTTTGGGAACGCTTGGGATCAGCACCACTTGAAAGACCAGCATGATAAGATGGGCGGTGTCAATGGGCTGGGAACAGGCCCCAGATGTGATAGAGAGAACTCTCTGGGTGACTGGAAGCCACTTAAATGGACCCGTTCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGAGCAGATTCCCATGAAGCAAAGGCCGAGTTGCAACCCAAAAGTGCAGCTGCTAATGAGACCCATTCAGGGGAAGCTGCTGCATGTGCAACATCTTCTGTGCCATCTGAAGATACAACTTCTAGAAAAAAGCCTAGGCTGAATTGGGGTGAGGGGCTTGCGAAGTATGAGAAGAAGAAAGTTGAGGTGCCTGATGTAAGTGCAAACAAAGATGGTCTTGTTTTGTCTACTAGTAACACAGAACCTTGTAATTTCCTCAGTCCCAGCTTAGTTGATAAAAGCCCAAAAGTTACAGGATTTTCCGAATGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCTGGTAtggatgataaattatttgggAAGACTGCAAATGTGGAGAATGATGTTAGTAATTTGACTGGTTCACCTGCTCCTGTGTCTGAAAATCATCTGCAGAGGTTTTCTTTTAACTTGGAGAAAATTGATATTGACTCCTTGAATAATTTGCGTTCTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTGTGGATTCTGGTCCAATGAGGTCCAATGCAATTAATAAGTTGCTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTActtgaaaatgaaatgaagttGCTAAAATCTGAATCTGGGGATACATCTCCATGTCCAGTAGCTTTGGGCTCCCAGATGGTAGGTAGTGATGAAAAATCCAGTGAAGAACAGGTTGGAGTCTCTGATCAGGTCATCCGGCTAGTACCATTGAAAATTGTTGATGATCCCAATATGGAGAAGATGCCTCTTTCAACTAATTTACATAGTATTGATGAAAATGGCAAGGAAGAGGAAATCGATAGTCCTGGAACAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTAATTAAAGCAGTTTCTTGTGATACCAGGGGATATGATAACTTCTCCAGGGACTTGGATGCTGCTCAGTCTACAGCTGTGAAATGCCTAGTTCCCTGTACTACTAGGAAAGATGCTAGTGTATCTGCTTATGTTGATGGCAATACTACTATGGAGCTAAAGGCGGATAGCATggatattttatatcatacaaTTATTTCTTCCAATAAAGAATCTGCCCACAGAGCTAGTGAGGTATTTGCTAAGTTATTGCCCAAAGATTGTTGCAAGATTGGGAAGATGGGAGCTAGCAGTGACACAGGCACTGATACCTTCATTATGGAAAAATTTGCTGAGAAAAAGCGATTTGCAAGATTTAAGGAGAGAGTTGTTGCACTTAAGTTCAGAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATTAGGAAATGCCGACCAAAAtctcacaaaaaaaatgaattaagtgtGCGAACTACCTGTAATGGTAACCAGAAGAATCGATCCTCCATTCGATCGCGTTTTCCCTTTCCTGTAGGAAATCAATTAAGCTTGGTTCCAACATcagagataattaattttacaagcAAACTGCTTTCAGAATCCCAAGTTAAAGTGCAGAGAAACAACCTGAAGATGCCAGCAttaattttggatgaaaaagagAAGATGATTTCAAAGTTTGTATCTAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATcagaagagagagaagttttCTTAGAGAAATTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTTCTTGACCACAGGACAACTGCTGACTGTGTTGAATTCTACtacaaaaatcataaatctgATTGTTTTGAGAAACTTAAGAAGCAAGATGTTGGTAAGCTAGGGAAGTCATTTTCAGCTAAAACTGACTTGGTGGCATCAGGTAAAAAATGGAATTGTGAATTGAATGCTGCTTCGCTTGAGATTTTGAGTGCAGCTTCATTGATGGCAGATGGCATTGCAGGTAATAAAAAAATGCGTGCACGAAGCTCTCTTTTGGGTGGATATGGTAAAGTAAAGACATCAAGGGTTGAGGACTTCATAGAGAAATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCAGCTGATGTATTGGCAGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAGTTGATCCTGTGGAAGGTAACAGGGATAGGAAGTTCCTGAAAGTGAACCCTTTATGCAAACCACCCATGACACCTGATGTTACTCAGGATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTACAGATTGGACAGATGATGAGAAGGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGGAAGGATTTTGCAAAGATAGCAAGGTGTGTTGGGACAAGATCCCAAGAACAGTGCAAAGTTTTCTTCAGCAAAGGTCGGAAATGCCTTGGCTTAGATCTCATGCGCCCAATACCTGAAAATGTTGGATCCCCAGTGAATGATGATGCTAATGGAGGTGAGAGTGACACAGATGATGCATGTGTTGTTGAGACAGGCTCAGTGGTTGGCACTGATAAGTCTGGCACTAAAACAGATGAGGACCTGCCTTTATATGGCATGAACACGTTTCATGATGAATCCAATCCTGTGGAAGCTAGGAACCTGTCAGCTGAATTAAATGAATCAAAGGAAACTAATGGGATGGAAGTAGATCTTGAAGATGCAAATGTGGTTTCTGATGCTTGTGCAATTAATATTGAATGCAAACAGGGCTGTGATGGTAGTGAAGTTGTCTTGTGTGGTTCTGATAAGTCTGGTTCTGTCAGTGGACAAGCAGCTATAATTATGTCAGATAGCACAGAAGTTGGAAAAGATAAAGCAAGTAAGTTGAAAGGTGCAGCTACAGAATTGATATCTGCTCCAGATATAAGTGAACCATGCGAGAGTAATTCTTTTGCTGAGGATAGAATGGTGGTTTCTGAGGTTTCTTCTGGTGGTCTTGTAAATGAATTGGAGAGGCAAAGAGTGTCGTCACCCCGATGTCTTGGTGATAGAGATAATAAACATGAAGCTGATTCAGGTATCATAGTTGATTTGAAAAGCTCTGTGCATGATTTAAGCCCTATGGTAAATGCTTCACTCTCATCTTTGGGCAATTCTTGTTCAGGATTGAGTTTTAGTACTGAAAATAAGCATGTGCCCCTTGGAAAGCCTCATGTCTCCGCATCATCTATGGAGGATCTTCATGCAACTTCAAATTCATTGTTGCAAAATACTGTTGCTGTTGATGTTCAATGTGAGAAAACAGTTAGCCAAGATCGCCTGTCCTCTACTTGTGATATTCAGGGAAGTAGAGATATGCACTGTCAGAATTCCATTAGCAATGGTGATCATCAGCTCCCTATTACTGGGAGTTCATCTGACCATGTTGATGTTAGCATCCTCCAGGGCTATCCCTTGCAAATTCCCATTAAGACAGAAATTAATGGCGATATGAATCTCAGCAGTTCAGCAACAGAATTGCCTCTTCTGTCCCAAAAGATTGAACAGGCTGATGATCATATCAAAGCATTCCAGTCTTCAGATTCAGACAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGGAAGATACTAACCAATCCTTCATCAGCACAGAAGCCTAATGTGGGTGCTAAAGGGAGTGAAGAAAATGGTACACATCACCCTAAGTTAAGCGGCAAGTCTTCTGGTCTGAAATTTACTGGCCATCATAGTGCTGatggaaatttgaaaattttgaagtttgaCCGTAATGATTATGTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACCGAATACAGACTGGTCTCTCATCATTGCCTGATTCTGCCATCTTGCTAGCAAAGTATCCTGCTGCCTTCAGTAATTATCCCACATCTTCTGCCAAATTGGAGCAACCGTCATTGCAGGCATTTTCCAAGAATAATGAACGGCTCCTGAATGGTGCATCCACTTATACGACTAGAGACATCAATGGCAGCAATGCTGTGATTGATTATCAGATGTTTAGAAGGGATGGTCCAAAAGTGCAGCCTTTTATGGTAGACGTGAAGCACTGCCAAGATGTATTCTCAGAGATgcagaaaataaatggttttgaAGCAATCTCAAGTTTACAGCAGCAGGGCAGGGGAGTGATGGGAATGAATGGTGTTGGAAGACCAGGGATTCTTGTGGGAGGATCATGCAGTGGTGTCTCAGATCCTGTGGCAGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGACTGGGAGTATTGCAAGAGAGGATGAATCTTGGGCAGGGGAAGGGGACTGA 5058 0.4189 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAISRSSSDKMLEEDIRPSISRGDGKYGRSSRENRGGGPFGQRDWRGHLWEPGNGSVNLPRRPQDVNNDQRSVDDALAYSSHPHSDFGNAWDQHHLKDQHDKMGGVNGLGTGPRCDRENSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSHEAKAELQPKSAAANETHSGEAAACATSSVPSEDTTSRKKPRLNWGEGLAKYEKKKVEVPDVSANKDGLVLSTSNTEPCNFLSPSLVDKSPKVTGFSECASPATPSSVACSSSPGMDDKLFGKTANVENDVSNLTGSPAPVSENHLQRFSFNLEKIDIDSLNNLRSSIIELVQSDDPTSVDSGPMRSNAINKLLIWKADISKVLEMTESEIDLLENEMKLLKSESGDTSPCPVALGSQMVGSDEKSSEEQVGVSDQVIRLVPLKIVDDPNMEKMPLSTNLHSIDENGKEEEIDSPGTATSKFVEPLPLIKAVSCDTRGYDNFSRDLDAAQSTAVKCLVPCTTRKDASVSAYVDGNTTMELKADSMDILYHTIISSNKESAHRASEVFAKLLPKDCCKIGKMGASSDTGTDTFIMEKFAEKKRFARFKERVVALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRTTCNGNQKNRSSIRSRFPFPVGNQLSLVPTSEIINFTSKLLSESQVKVQRNNLKMPALILDEKEKMISKFVSSNGLVEDPLAIEKERAMINPWTSEEREVFLEKFAAFGKDFRKIASFLDHRTTADCVEFYYKNHKSDCFEKLKKQDVGKLGKSFSAKTDLVASGKKWNCELNAASLEILSAASLMADGIAGNKKMRARSSLLGGYGKVKTSRVEDFIEKSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGNRDRKFLKVNPLCKPPMTPDVTQDVDDETCSDESCGEMDPTDWTDDEKAAFLQAVSSFGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSVVGTDKSGTKTDEDLPLYGMNTFHDESNPVEARNLSAELNESKETNGMEVDLEDANVVSDACAINIECKQGCDGSEVVLCGSDKSGSVSGQAAIIMSDSTEVGKDKASKLKGAATELISAPDISEPCESNSFAEDRMVVSEVSSGGLVNELERQRVSSPRCLGDRDNKHEADSGIIVDLKSSVHDLSPMVNASLSSLGNSCSGLSFSTENKHVPLGKPHVSASSMEDLHATSNSLLQNTVAVDVQCEKTVSQDRLSSTCDIQGSRDMHCQNSISNGDHQLPITGSSSDHVDVSILQGYPLQIPIKTEINGDMNLSSSATELPLLSQKIEQADDHIKAFQSSDSDKTSRNGDVKLFGKILTNPSSAQKPNVGAKGSEENGTHHPKLSGKSSGLKFTGHHSADGNLKILKFDRNDYVGLENVPMRSYGYWDGNRIQTGLSSLPDSAILLAKYPAAFSNYPTSSAKLEQPSLQAFSKNNERLLNGASTYTTRDINGSNAVIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQKINGFEAISSLQQQGRGVMGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQTGSIAREDESWAGEGD 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 200 223 - -
Ssu7g1050 1685 SMART sant 997 1045 IPR001005 -
Ssu7g1050 1685 SMART sant 782 830 IPR001005 -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 179 268 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 983 998 - -
Ssu7g1050 1685 Gene3D - 762 834 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 1666 1685 - -
Ssu7g1050 1685 CDD SANT 1001 1039 IPR001005 -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 1444 1477 - -
Ssu7g1050 1685 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1661 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 78 101 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 43 140 - -
Ssu7g1050 1685 SUPERFAMILY Homeodomain-like 998 1047 IPR009057 -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 976 1000 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 1 31 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 8 31 - -
Ssu7g1050 1685 ProSiteProfiles SANT domain profile. 999 1039 IPR017884 -
Ssu7g1050 1685 ProSiteProfiles SANT domain profile. 781 832 IPR017884 -
Ssu7g1050 1685 Pfam Myb-like DNA-binding domain 1000 1039 IPR001005 -
Ssu7g1050 1685 Pfam Myb-like DNA-binding domain 785 826 IPR001005 -
Ssu7g1050 1685 Gene3D - 974 1052 - -
Ssu7g1050 1685 MobiDBLite consensus disorder prediction 1085 1109 - -
Ssu7g1050 1685 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1661 - -
Ssu7g1050 1685 SUPERFAMILY Homeodomain-like 769 829 IPR009057 -
Ssu7g1050 1685 Coils Coil 423 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1050 Ssu-Chr7 23016057 23025356 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ssu7g1050 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1050 - - gmx:100810588 2975.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1050 7 23016057 23025356 Ssu7g1050 7 23016057 23025356 ECH