Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1026 ATGTTCAACATCCTAGCATTGTCTCCAAATGGGAAGGTGATTGTTGTGGAGTTCATATTGCCAGAAGAACCAGAACCAACTGAAGAATCCCAGCTTGTTTCCACTCTCGACAACCTCATGTTTATCACAGTTGGTGGAAGGGAAAGAACTCAGAAACAATATGAGAATTTGTGCAAGCTCTCaggattttcaaaatttcaagttgCTTGTCGTGCCTTCTCTAGTTTGGGAGTGATGGAATTTTACAAATAA 252 0.377 MFNILALSPNGKVIVVEFILPEEPEPTEESQLVSTLDNLMFITVGGRERTQKQYENLCKLSGFSKFQVACRAFSSLGVMEFYK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1026 83 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 83 IPR016461 GO:0008168
Ssu7g1026 83 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 83 - -
Ssu7g1026 83 Gene3D Vaccinia Virus protein VP39 6 72 IPR029063 -
Ssu7g1026 83 Pfam O-methyltransferase domain 6 64 IPR001077 GO:0008171
Ssu7g1026 83 PANTHER O-METHYLTRANSFERASE 6 83 IPR016461 GO:0008168
Ssu7g1026 83 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 80 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1026 Ssu-Chr7 22400032 22401656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1026 6 73 Monolignol Biosynthesis Gene Families AT5G54160 43.478 1.01e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1026 - - gmx:100787536 153.68