Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1025 ATGTTAAGACAAAAACACGCTTTGTCTCCAAATGGGAAGGTGATCGTTGTGGAGTTCATATTGCCAGAAGAACCAGAACCAACTGAAGAATCCCAGCTTGTTTCTACTCTCGACAACCTCATGTTTATCACGGTTGGTGGAAGGGAAAGAACTCAAAAACAATATGAAAACTTGTGCAAGCTCGCTGGATTTTCAAAATGTAAAGTTGCTTGTCGCGCCTTCTCTAGTTTGGGAGTGATGGAATTTTACAAATAA 255 0.4039 MLRQKHALSPNGKVIVVEFILPEEPEPTEESQLVSTLDNLMFITVGGRERTQKQYENLCKLAGFSKCKVACRAFSSLGVMEFYK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1025 84 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 84 IPR016461 GO:0008168
Ssu7g1025 84 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 81 IPR029063 -
Ssu7g1025 84 PANTHER O-METHYLTRANSFERASE 5 84 IPR016461 GO:0008168
Ssu7g1025 84 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 5 84 - -
Ssu7g1025 84 Pfam O-methyltransferase domain 3 65 IPR001077 GO:0008171
Ssu7g1025 84 Gene3D Vaccinia Virus protein VP39 5 73 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1025 Ssu-Chr7 22376936 22379197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1025 7 84 Monolignol Biosynthesis Gene Families AT1G63140 41.250 8.82e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1025 - - gmx:100798347 148.288