Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1014 ATGACCCAAAATGTGGACCTTGATTTGAATTTTTccGCTGTATGCCATAATTGGTCAGATGAAAAATGCGTAGAAATTTTAAGCAATTGTCACAAAGCATTGCCTCCAAATGGAAAGGTGATTGTTGTGGAGTTGATATTGACAGAGGAACCAGAACCAACTGAAGAATCCCAACTTGTTTACACTCTCGACAACCTCATGTTTATCACGGTTGGTGGAAGGGAAAGAACTCGAAAACAATATGAGAATTTGTGCAAGCTCTCcggattttcaaaatttcaatttgcttGTCTTGCCTTCTCTAGTTTGGGAGTGatggaattttataaataa 333 0.3453 MTQNVDLDLNFSAVCHNWSDEKCVEILSNCHKALPPNGKVIVVELILTEEPEPTEESQLVYTLDNLMFITVGGRERTRKQYENLCKLSGFSKFQFACLAFSSLGVMEFYK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1014 110 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 110 IPR016461 GO:0008168
Ssu7g1014 110 Pfam O-methyltransferase domain 11 91 IPR001077 GO:0008171
Ssu7g1014 110 Gene3D Vaccinia Virus protein VP39 12 98 IPR029063 -
Ssu7g1014 110 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 11 110 - -
Ssu7g1014 110 PANTHER O-METHYLTRANSFERASE 11 110 IPR016461 GO:0008168
Ssu7g1014 110 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 108 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1014 Ssu-Chr7 22230392 22231407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1014 14 110 Monolignol Biosynthesis Gene Families AT1G21110 44.444 5.29e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1014 - K13066 gmx:100802593 162.925