Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1011 ATGGAGAGTCTCAAGTTGGCATCTTTGACTCTGTCTCCTCCTTCTCGACGCTCTGGGATGCTAGGGAAGCGGTTGAATTTTCCTTTGCTTACTATTGATTCTGCTGCACACTCTTGCTGTTGCAAGGCTGATCTTGCTGCTGGATCATCAAGTATTCCACCCCCAAATATCAGGTTTTCTTGTAGATTTTCACCGAGTGTAGCGACAGCAACATGGACCTCAAATATTTCTACCAAACATTGGATATTGCACTCAACTGCACAGATAGTAAATATAATGACAAGTAATGAAGATCAGAGTATGTGGGAAGCATGTAGACAAGCTCTTTCTGCATTTAACTTCAGTGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGTCTTGTTCATTCCCCTTATTGGGGAGAAGAACGTAAGAAGGAAGTTCTGAAATTCGAGACAGTAAATGGAATATTAGACTATCTGAGGAGTTTAAATCTTTCTGATGATGATCTGTCCAAGTTGCTTAAAAGGTTTCCAGAAGTTCTTGGATGTAATTTAGAGGAAGAGTTGAAAGGCAATGTAAAGATCCTGGAGGAGCAGTGGAGTATTGAAGGAAAATCTCTTAGGAACCTTCTCCTTAGAAACCCAAAAGTTTTGGGTTATAATGTTGATTGTAAGGGAGACTGCATTGCACAATGCACTAGATGCTGGGCTCGCTTCTAG 708 0.4068 MESLKLASLTLSPPSRRSGMLGKRLNFPLLTIDSAAHSCCCKADLAAGSSSIPPPNIRFSCRFSPSVATATWTSNISTKHWILHSTAQIVNIMTSNEDQSMWEACRQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKKEVLKFETVNGILDYLRSLNLSDDDLSKLLKRFPEVLGCNLEEELKGNVKILEEQWSIEGKSLRNLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1011 235 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 234 - -
Ssu7g1011 235 Gene3D Transcription termination factor 3, mitochondrial 85 230 IPR038538 -
Ssu7g1011 235 PANTHER CGI-12 PROTEIN-RELATED 18 234 IPR003690 GO:0003690|GO:0006355
Ssu7g1011 235 Pfam mTERF 153 218 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ssu7g1011 mTERF 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1011 - - gmx:100797265 395.971