Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1003 ATGGGAGTTTCTTCACAGCCCctctctttgaaaaatattCTTCAGGGAACTGAAGAAAACAAAACTTCATCATATGGGTGTTTGTGGAACAAAGTCTTGGCAGTAGAAGCCAAGAAGCAGAAGGGCACAAAGAGAAGTGTTAGGAGGCCAAGAAGGATTGTGATGAAGAGGAGGGTTGGTTCTAGAAGGGGATCCAATGGGATTCGGAGGCGTGTCAGAACATTGAAGAGCCTTATACCCAACAGTGACTCCTTGGGGTTGGATGGACTCTTCAGAGAAACAGCTAATTACATATTGTCTTTACAAACGAGAGTGAGAGTCATGCAGGTTATGGTTAAGGTATTGACAGGGTCTGACGAGTGA 363 0.4325 MGVSSQPLSLKNILQGTEENKTSSYGCLWNKVLAVEAKKQKGTKRSVRRPRRIVMKRRVGSRRGSNGIRRRVRTLKSLIPNSDSLGLDGLFRETANYILSLQTRVRVMQVMVKVLTGSDE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1003 120 CDD bHLH_AtIBH1_like 57 112 IPR044549 GO:0006355
Ssu7g1003 120 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 117 IPR044660 GO:0006355
Ssu7g1003 120 PANTHER TRANSCRIPTION FACTOR UPBEAT1 8 117 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g1003 49 119 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 55.556 9.60e-20 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1003 - - gmx:100794627 167.933