Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0994 ATGGAGCCTCTCTCAGCCAccaaacacaacaacaatcCCTCCAAGCCTTCTTCCCTCCACGTGGAGGCCCCGGCGCCGGAGCCGAGTCCCCTCCGGAAGATCATCGCGGTGGCGTCGATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTGCAGCTCTCCCTGCTGACCCCCTACGTCCAGCTGCTGGGGATTCCGCACACCTGGGCCGCCTTCATCTGGCTCTGCGGCCCAATCTCGGGCATGCTGGTCCAGCCCATCGTGGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGGCGGCGCCGCCCCTTCATCGCCGCCGGCGCCCTCGCCGTGGCCGTGGCCGTCTTCCTCATCGGCTACGCCGCCGACCTCGGCCACATGTTCGGCGACTCCGTCACCAAGAAAACCCGCCCCCGCGCCATCGCCATCTTCGTCGTCGGCTTCTGGATCCTGGACGTCGCCAACAACATGCTCCAGGGCCCCTGCCGCGCCCTCCTCGCCGACCTTTCCGCCGGCCACCAGCGCAAGACGCGGAACGCCAACgccttcttctccttcttcatggCCGTCGGGAACGTGCTCGGGTACGCCGCGGGGTCCTACAGCGGCCTCCACCACGTGTTCCCCTTCACGAAAACCAAAGCCTGCGACGTCTACTGCGCGAATCTCAAAAgctgcttcttcctctccatcGCGCTGCTCCTCACGCTGGCCACCGCGGCCATGACGTACGTGAAGGAGAAAACGTTGTCGTCCGAGAAGAGCAGCGCGGACGCCGAGGAGGAAGGGTCCCACGGGGGCACGCCGTGCTTCGGGGAGCTATTCGGCGCGTTTCGGGAGCTGAAGCGTCCCATGTGGATCCTCCTCCTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCCTTCCTGCTCTTCGACACGGACTGGATGGGGAAAGAGGTGTACGGGGGAACGGTTGGGGAAGGGAAGGCCTACGACAGGGGCGTGCGCGCGGGCGCGTTGGGCCTCATGCTGAACTCCGTGGTTCTCGGTGCGACGTCGTTGGGGGTCGAAGTGCTGGCGCGTGGGGTTGGGGGCGTCAAGAGGTTGTGGGGGATTGTTAACTTCTTGCTCGCTATTTGTTTGGCCATGACCGTCTTGGTTACCAAGTTGGCCGAACATTCTCGCCGATACACCGTTCTTCCTAACGGCCACAAGGAGCCTCTGCCTCCTCCCGGCGGCGTCAACGCCGGCGCCTTGGCTCTCTTCGCCGTCCTCGGAATCCCTCTCGCGATTACTTACAGCATACCTTTTGCTCTAGCATCAATATTCTCCAGCACCTCAGGGGCAGGACAAGGATTATCTCTCGGGGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCAGTGACAAGTGGACCATGGGATGCTCTATTTGGCGGTGGTAACTTGCCAGCGTTCGTGGTGGGTGCTGTGGCGGCTGCAGCCAGTGGCATTTTATCCATAATCCTGCTGCCATCTCCTCCGCCGGATTTGGCCAAAGCAGCAACCGCAACTGGAGGAGGGTTCCATTAA 1563 0.6078 MEPLSATKHNNNPSKPSSLHVEAPAPEPSPLRKIIAVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAVAVFLIGYAADLGHMFGDSVTKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGHQRKTRNANAFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACDVYCANLKSCFFLSIALLLTLATAAMTYVKEKTLSSEKSSADAEEEGSHGGTPCFGELFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGKAYDRGVRAGALGLMLNSVVLGATSLGVEVLARGVGGVKRLWGIVNFLLAICLAMTVLVTKLAEHSRRYTVLPNGHKEPLPPPGGVNAGALALFAVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVTSGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATATGGGFH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0994 520 PANTHER SUGAR TRANSPORTER 23 511 - -
Ssu7g0994 520 MobiDBLite consensus disorder prediction 1 25 - -
Ssu7g0994 520 SUPERFAMILY MFS general substrate transporter 32 505 IPR036259 -
Ssu7g0994 520 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 506 IPR005989 GO:0005887|GO:0008515|GO:0015770
Ssu7g0994 520 Gene3D MFS general substrate transporter like domains 28 514 IPR036259 -
Ssu7g0994 520 CDD MFS_SLC45_SUC 34 480 - -
Ssu7g0994 520 Pfam MFS/sugar transport protein 39 299 - -
Ssu7g0994 520 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 23 511 - -
Ssu7g0994 520 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0994 Ssu-Chr7 21920439 21924001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0994 27 520 Sucrose Transporter Gene Family AT1G22710 71.200 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0994 K15378 - gmx:547679 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0192 9 11652864 11653301 Ssu7g0994 7 21920439 21924001 PCT
Ssu7g0994 7 21920439 21924001 Ssu7g0994 7 21920439 21924001 PCT