Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0991 ATGAAGCTCCAAGCACGAGAACATCCCCTGCTACTCTCCTATGTCTTCTTCTCCGCTGTCATCTGCACGATTGCAGGAACCACCATCATCTCACCAGGCACAACCCTCTACGCTTCCAACACAACCCAATCATGGTCCTCTCCCAACAACACTTTCTCTCTCCGCTTCCTCCCCCTGCTCTCTCCAACTTCCCCTCCTACCTTCATCGCCGCCATTGTCTACTCCGGCGGCGCCCCCGCCGTCTGGTCCGCCGGAAACGTGGACTCCGCCGGCTCCCTCCGGCTCCTCCCCGCCGGCAACCTCGTCCTCGTCAACGGGTCGGGCTCCACCGTGTGGGACTCCGGAACTTCCAACATGGGTGTCTCCTCCGCCACGCTTCACGACAACGGAAACCTGGTTCTCTCCAACGCCACCGGTTCCGTGTGGTCGAGCTTCGACAACCCCACCGACACCATCGTGCCGTTTCAGAACTTCACCGTTGGTATGGTTTTGCGTTCTGGGTTGTTCTCGTTTTCCGTTCTTAGGTCCGGGAACCTCACCCTCAAGTGGAGTGACAGCGTGCCTTACTGGGATCAAGGCTTGAACTCTTCCATGAGTGCGGTGAATTTGAGTTCACCCGTTTTGGGGTTGCAACCGAGGGGGGTTTTGCAGCTTTTTGATACCAATTTGAGTGCCCCTGTGGTGGTTGCTTATAGCAGTGACTATGACGAAGGGAGTGATGTGTTGAGAGTTTTGAAGTTGGATGGTGATGGGAATTTGAGGCTTTATAGCTCTAAGAGGGGTAGTGGGAGTGTGAGTTCTAGATGGGTTGCTGTTGAGGATCAGTGCGAGGTTTTTGGTTACTGTGGAAACAATGGTGTCTGTAGTTACAATGTTTCTGATTCTAGCCCCATTTGTGGATGTCCGTCTCAGAATTTTCAGATGGTTGATCCTAGTGATAGTAGGAAAGGGTGTAGGAGGAAGGTTAGGCTTGAGGATTGTGTGGGGAAGGTGGCGATGTTGCAAGTGGACCATGCTCGATTCTTGACCTATCCTCCTCTATTTTTGATCAATCCTGAGGTGTTTTTCATTGGTATATCGGCTTGCAGTGGAAACTGTCTTGCAGCGGATTCTTGTTTTGCTTCCACTTCCTTGTCTGATGGAAGCGGACTTTGTTACATAAAGACAACGAATTTTATTAGTGGCTACCAGAATCCTGCTCTACCTAGCACTTCGTATATCAAGGTTTGTGGACCACTGGCTCCAAACTCGGCGCCTTCATTGGAGAATGCGGGTTGGAGGGTACATGGTTGGGTAGTAGCTCTTGTTGTTTTGAGTGCCCTTTTGGGTCTCCTTGTCTTTGAGGGTGGTTTATGGTTGTGGTGCTATAGAAACAGGCAAGGATTTAGAGGGTTTGCTGCTCAGTATACTCTTCTTGAGTATGCTTCTGGTGCACCGGTTCATTTCTCTTATAAGGAGCTTCAAAGGTCCACAAAAGGGTTCAAGGAGAAACTAGGTGATGGGGGGTTTGGTGCAGTTTATAAAGGAACTCTTGCTAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGGTGTAGATCAGGGAGAGAAACAGTTTAGGATGGAAGTTTCTACCATAAGTAGTACccatcatttaaatttagtgAGGCTAATTGGTTTTTGCTCCGAAGGGCGTCACAGGCTTCTAGTGTATGAGTTTATGAAAAATGGATCTCTTgataatattctttttgttaATGAAGAACAAGAGTCAGGGAAATTGTTGAACTGGGGGTATAGATTCAACATTGCCCTAGGTGCTGCTAAGGGCTTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCTGAAAACATTCTTTTAGATGAGAATTACAACGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTCTTGAATTCAGTGGATCACAGGCACCGAACCTTGACAAGTGTGAGAGGAACCAGAGGGTATTTAGCTCCGGAATGGCTAGCAAATCTTCCCATAACTTCCAAATCTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAGGATACAAGTAGAAGAAAGTTTTCCATCTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTTATTGACAGAAGATTGGTTGGCCAAGAAATCGACTTGGAGCAAGTGAAAAGAGTGCTTATGGCATGCTTCTGGTGCATACAGGAACAACCATCTCAGAGGCCAACTATGAGCAAAGTTGTGCAAATGCTAGAAGGTGTGACAGATATTGAGAGACCACCGGCCCCAAAAATCAATAGCAATGCCACTCCTATCTCCACTATTGCACCTTCATCAGCTCCAACTTACTCCTCATCTTCATCTTTGTGTACTTTTGAGGCGTCTCCCTTGGCTTTGGAAGGAGCACTGAGAAAATGA 2466 0.4692 MKLQAREHPLLLSYVFFSAVICTIAGTTIISPGTTLYASNTTQSWSSPNNTFSLRFLPLLSPTSPPTFIAAIVYSGGAPAVWSAGNVDSAGSLRLLPAGNLVLVNGSGSTVWDSGTSNMGVSSATLHDNGNLVLSNATGSVWSSFDNPTDTIVPFQNFTVGMVLRSGLFSFSVLRSGNLTLKWSDSVPYWDQGLNSSMSAVNLSSPVLGLQPRGVLQLFDTNLSAPVVVAYSSDYDEGSDVLRVLKLDGDGNLRLYSSKRGSGSVSSRWVAVEDQCEVFGYCGNNGVCSYNVSDSSPICGCPSQNFQMVDPSDSRKGCRRKVRLEDCVGKVAMLQVDHARFLTYPPLFLINPEVFFIGISACSGNCLAADSCFASTSLSDGSGLCYIKTTNFISGYQNPALPSTSYIKVCGPLAPNSAPSLENAGWRVHGWVVALVVLSALLGLLVFEGGLWLWCYRNRQGFRGFAAQYTLLEYASGAPVHFSYKELQRSTKGFKEKLGDGGFGAVYKGTLANQTVVAVKQLEGVDQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNILFVNEEQESGKLLNWGYRFNIALGAAKGLTYLHEECRNCIVHCDVKPENILLDENYNAKVSDFGLAKLLNSVDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEISEDTSRRKFSIWAYEEFEKGNIMGVIDRRLVGQEIDLEQVKRVLMACFWCIQEQPSQRPTMSKVVQMLEGVTDIERPPAPKINSNATPISTIAPSSAPTYSSSSSLCTFEASPLALEGALRK 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0991 821 PIRSF SRK 3 813 IPR024171 GO:0004674
Ssu7g0991 821 PANTHER OS07G0415500 PROTEIN 17 808 - -
Ssu7g0991 821 ProSiteProfiles Bulb-type lectin domain profile. 149 268 IPR001480 -
Ssu7g0991 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Ssu7g0991 821 SMART blect_4 27 148 IPR001480 -
Ssu7g0991 821 Gene3D Phosphorylase Kinase; domain 1 463 566 - -
Ssu7g0991 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 193 IPR036426 -
Ssu7g0991 821 ProSiteProfiles Protein kinase domain profile. 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0991 821 SUPERFAMILY Protein kinase-like (PK-like) 475 768 IPR011009 -
Ssu7g0991 821 Pfam D-mannose binding lectin 88 160 IPR001480 -
Ssu7g0991 821 CDD B_lectin 29 148 IPR001480 -
Ssu7g0991 821 ProSiteProfiles EGF-like domain profile. 272 312 IPR000742 -
Ssu7g0991 821 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Ssu7g0991 821 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Ssu7g0991 821 SMART serkin_6 492 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0991 821 Gene3D - 24 146 IPR036426 -
Ssu7g0991 821 Pfam S-locus glycoprotein domain 238 302 IPR000858 GO:0048544
Ssu7g0991 821 Gene3D Transferase(Phosphotransferase) domain 1 567 782 - -
Ssu7g0991 821 Pfam Protein kinase domain 495 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0991 821 Gene3D - 147 269 IPR036426 -
Ssu7g0991 821 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 17 808 - -
Ssu7g0991 821 CDD STKc_IRAK 498 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0991 Ssu-Chr7 21819835 21822300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0991 463 777 Receptor kinase-like Gene Family AT5G20050 42.202 2.44e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu7g0991 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0991 - - gmx:100810753 1426.77