Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0968 ATGGGGTTACCTTCCACATCATTAGACAGTATCTGGTGGGTGTTTACACTTCCGGCCATAGCAGGAACACAAAACTTGCTTGGCAACCCGGTCTTAGTGATCCTAACCGCACTTTCTTCCATTGGGCTTCTAGCATGGGCCTTCCCAAGAGGTGTCGCATGGAGAAACGGAAGGAACCAAATGGGCCAGGTCCCTATTCCGGGGCCCAAAGGAGTCCCAATCTTTGGCATCTTATTTAGCCTGAACCGTGGCCTACCTCACCGTACCCTTGCTTCCATGGCTTCAACTCTAACCGCTACAAAACTCATGCGCTTCAGTTTGGGGTCAACCCCAGCAGTCATAACCTCAGACCCTCACGTGGCACGTGAAATCTTGAACTCACCCCATTTCGCTGACCGTCCCATCAAACAATCCGCTAAGAGCCTCATGTTCAACCGCGCCATTGGGTTCGCACCAAACGGCGCGTATTGGCGTTTGCTGCGGAGGGTTGCCTCGACCCACCTCTTCTCTCCCCGGCGCATTCTAGCCCACGAGCCCGGCCGCTTGCTAGACTGCGCCGCCATGTTGCGTGCCGTAGCTCGTGAACAATCGAAACGCGGGTTCGTGTGCCTAAGGAAACACCTTCAGGATGCAGCTCTTAACAATGTTATGGGCACCGTTTTTGGAAGAAGGTACAGCCAAGATGAGTGCCACAAAAGCTGCGAGGTTGAAGAGGTGCGTGATATGGTGAGGGAAGGGTTTGAAATTCTGGGAGCTTTCAACTGGTCTGATTATGTTCCTTGGATCAGCTTCTTTTATGACCCTTTTCGTATTCGAGAACGGTGTTCGGTTCTTGCGCCCAGAGTTAAGAAATTTGTCGAGAGGGTTTTGGAGGAGCACCGAATGGCTCCGCTGAGGGGGCTGTCTGATGACTCGGACTTTGTGGATGTGCTGCTCTCCCTAGAGGGGGATGACAAACTCCGAGATGATGACATTATTGCCGTTTTATGGGTTTGTGTTTCTTTACTCTATCTTAACGTACGACAGGAGATGATATTTCGTGGCACAGATACAACAGCACTTCTTACTGAGTGGATAATGGCCGAGCTAGTTTTAAACCAACAAGTGCAAACCAAGCTTCATGATGAACTCAACAGAGTTGTGGGAAACAAAAAGGTAGTTACAGACGCTGATGTGATCAAATTGCCATACCTCAAAGCCATTGTGAAGGAAACATTGCGATTGCATCCAATTGGGCCCCTCCTTTCTTGGGCTCGTTTGTCCACGTCAAATGTCCAGCTCAACAATGGGATGGTGGTCCCAGCCAACACCACAACAATGGTGAACATGTGGGCCATAACCCACGACCCCAAGGTGTGGCACGAGCCACTAGTGTTCAAGCCAGAGAGGTTTATGAAGAGTGAAGGAGGGGTTGAAGTGGATGTTAAGGGTGTTGACCTTAGGCTTGCACCATTTGGAGCTGGACGTAGGGTTTGCCCAGGTAAGAACCTAGGCCTTGTGACTGTGAGCCTTTGGGTGGCTAACTTGGTTCACCACTTTCAATGGTTCCAAGACATGGCTAACCCGGTTGACCTAACCGAGGTGCTCAAGCTATCTTGTGAGATGAAGAACCCCCTCAACGCTATGGCTTTTCCtaggtttatttaa 1647 0.5027 MGLPSTSLDSIWWVFTLPAIAGTQNLLGNPVLVILTALSSIGLLAWAFPRGVAWRNGRNQMGQVPIPGPKGVPIFGILFSLNRGLPHRTLASMASTLTATKLMRFSLGSTPAVITSDPHVAREILNSPHFADRPIKQSAKSLMFNRAIGFAPNGAYWRLLRRVASTHLFSPRRILAHEPGRLLDCAAMLRAVAREQSKRGFVCLRKHLQDAALNNVMGTVFGRRYSQDECHKSCEVEEVRDMVREGFEILGAFNWSDYVPWISFFYDPFRIRERCSVLAPRVKKFVERVLEEHRMAPLRGLSDDSDFVDVLLSLEGDDKLRDDDIIAVLWVCVSLLYLNVRQEMIFRGTDTTALLTEWIMAELVLNQQVQTKLHDELNRVVGNKKVVTDADVIKLPYLKAIVKETLRLHPIGPLLSWARLSTSNVQLNNGMVVPANTTTMVNMWAITHDPKVWHEPLVFKPERFMKSEGGVEVDVKGVDLRLAPFGAGRRVCPGKNLGLVTVSLWVANLVHHFQWFQDMANPVDLTEVLKLSCEMKNPLNAMAFPRFI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0968 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 485 494 IPR017972 GO:0005506|GO:0016705
Ssu7g0968 548 PRINTS E-class P450 group I signature 482 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS E-class P450 group I signature 492 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS E-class P450 group I signature 442 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS E-class P450 group I signature 399 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 Gene3D Cytochrome P450 58 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 Pfam Cytochrome P450 67 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS P450 superfamily signature 483 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PRINTS P450 superfamily signature 492 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0968 548 PANTHER CYTOCHROME P450 78A7-RELATED 1 546 - -
Ssu7g0968 548 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 1 546 - -
Ssu7g0968 548 SUPERFAMILY Cytochrome P450 66 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0968 Ssu-Chr7 21111059 21114234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0968 7 547 Cytochrome P450 AT5G09970 61.538 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0968 K20619 - nnu:104589294 750.355