Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0967 atggaggTTCACATCTTGCTTTTACTTGTCACACTAGTCCTGGTCATGACCCGGTTCATTCTGAACCGCCGCGGTAAGAGAAACCAAGCCCCCGGTCCAACCGGGTTCCCCATAATCGGAAACCTCCACCAACTGGGCCCCAAGCCCCACTGCTCCCTCTCCTCGCTGGCCCAAACCTACGGCCCAATAATGTCCCTCCGCCTGGGCTCGGTCACCGTGGCCGTGGCCTCCTCCCCCGCGGTGGCCCAAGAAATCCTCCAAAAGAACGACCAAGCCTTCGCGAACCGCCCCATCCCGGAATCCGTGGCGGCCCAGCCCAACGTAGGGGACACCCTGGCCTGGGCTCCCGCCGACCCACGGTGGCGCAACCGGCGCCGCGTCTGCACCACCCAGATTTTCACAACCCAACGCCTCGACCTCCTCCAGCACCTGCGCCACCGGAAAGTGCAGCAACTCGTTGAGCACCTTCGCAAGCAAGCTTCGAGCGGAAAAATCGTTGACGTAGGGGAACTGACGTTTGCGACGATGCTGAACCTGGTTTCGAACACGGTGTTCTCGGAGGATTTGGTGGACCCCGAGTTCGAGAGTGCGGGGGAGTTCAAGGAGCTTGTGTGGAGGATCATGGAAGACGCGGGGAAGGTTAACCTCTCCGACTACTTTCCCTTAATCAAGAGGTTCGACTTGCAGGGCGTGAAGCGACACGTGAAGGTTTCGTATGTGAGACTGCACGAGATTTTTGCTGACATCATTCGGAAACGTGTCGCGGAGAGAGAGAGTTCGCGCGACGCAAAGGGGGACTTCTTGGATGTGTGGCTTGATCATTGTCAACAAGGGGCGGGCTCCGATTTCAGCGTTGAAAGCATCAAGCCATTGATTCTGGATTTGTTCATTGCCGGAAGTGACACTTCAGGATCAACATCAGAATGGGCAATGGCAGAGCTTCTACGCAACCCAGAAGTAATGCAGAAAGCAAGAGAGGAACTGATCCGAGTGATTGGCACCTCCAATGAAGTAAAAGAATCAGACATCTCTAGACTTCCATACATCCAAGCAATAGTGAAAGAAACCCTTCGGCTTCATCCACCTGTACCCCTTCTCTTGCCTTATGTTGCAGGACATGATGTCGAAGTAAGTGGCTACACTATTCACAAAGGAAACCAAGTCCTCATTAATGCATGGTCTATTGGGAGGAACCCCCAGTTTTGGGATGACCCTTTGTTATTTCAGCCTGAAAGGTTTCTTAGGTCCAACATAGATTTCAAAGGCAGGGATTTCGTGTATTTACCTTTCGGCGCTGGTAGGAGAATTTGCCCTGGTTTGCCACTTGCTAATAGGATGATTACTTTAATGCTGGCTGCGTTTGTGCACTCTTTCAAGTGGGAGCTTCCTCAGGGTGTCACTCCTCAAACGCTTGACATGAGTGAGCAGTATGGAATAACATTGAAGAAGCTTTCTCCTCTTTGTGCTATTCCAATATCAGTATGA 1485 0.5246 MEVHILLLLVTLVLVMTRFILNRRGKRNQAPGPTGFPIIGNLHQLGPKPHCSLSSLAQTYGPIMSLRLGSVTVAVASSPAVAQEILQKNDQAFANRPIPESVAAQPNVGDTLAWAPADPRWRNRRRVCTTQIFTTQRLDLLQHLRHRKVQQLVEHLRKQASSGKIVDVGELTFATMLNLVSNTVFSEDLVDPEFESAGEFKELVWRIMEDAGKVNLSDYFPLIKRFDLQGVKRHVKVSYVRLHEIFADIIRKRVAERESSRDAKGDFLDVWLDHCQQGAGSDFSVESIKPLILDLFIAGSDTSGSTSEWAMAELLRNPEVMQKAREELIRVIGTSNEVKESDISRLPYIQAIVKETLRLHPPVPLLLPYVAGHDVEVSGYTIHKGNQVLINAWSIGRNPQFWDDPLLFQPERFLRSNIDFKGRDFVYLPFGAGRRICPGLPLANRMITLMLAAFVHSFKWELPQGVTPQTLDMSEQYGITLKKLSPLCAIPISV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0967 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Ssu7g0967 494 Pfam Cytochrome P450 31 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 Gene3D Cytochrome P450 16 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 492 - -
Ssu7g0967 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 492 - -
Ssu7g0967 494 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu7g0967 494 SUPERFAMILY Cytochrome P450 24 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0967 Ssu-Chr7 21029844 21035366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0967 3 492 Cytochrome P450 AT2G45550 42.771 5.50e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0967 - - vra:106769993 823.928