Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0958 atgGCTTATAGAACTTCAAGTATCACAACTTTTATTGTCACACTGGTGTTGTTAGGCACAATATGTGAAGCACAATTGTCTTGTACGTTTTATGACAGTGCATGCTCCAATGCACTTAGCACTATAAGATCTGTGATTCGTAGTGCAGTATCTAAGGAGCGTCGCATGGCTGCGTCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATTTTGCTCGATGATAGCTCCTCTATCGAGGGCGAAAAGAGTGCACTTCAGAAAGCTAACTCAATAAGGGGATATAACATCATTGATCAAGCAAAAGCTGAGGTGGAGAAAGTATGCCCCGGAGTGGTGTCATGTGCTGACATTGTAGCAGTAGCAGCACGTGATGCATCATTTGCTGTGGGTAGTCCATCATGGACTGTGAAGCTTGGACGGAGAGATTCTACCACCGCAAGCAAAAGTTTGGCTACTAGTGACCTTCCACGTTTTACAGATGATCTTGAAACTCTTATCTCTAAATTCAAGAAGAAGGGGCTCACTGCCAGAGACATGGTTACTTTATCcggtaattaa 579 0.4266 MAYRTSSITTFIVTLVLLGTICEAQLSCTFYDSACSNALSTIRSVIRSAVSKERRMAASLIRLHFHDCFVQGCDASILLDDSSSIEGEKSALQKANSIRGYNIIDQAKAEVEKVCPGVVSCADIVAVAARDASFAVGSPSWTVKLGRRDSTTASKSLATSDLPRFTDDLETLISKFKKKGLTARDMVTLSGN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0958 192 PANTHER PEROXIDASE 7 191 - -
Ssu7g0958 192 SUPERFAMILY Heme-dependent peroxidases 25 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 Pfam Peroxidase 43 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PANTHER PEROXIDASE 72-RELATED 7 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 Gene3D Peroxidase, domain 2 163 191 - -
Ssu7g0958 192 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Plant peroxidase signature 184 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Ssu7g0958 192 Gene3D - 29 162 - -
Ssu7g0958 192 PRINTS Haem peroxidase superfamily signature 185 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0958 192 ProSiteProfiles Plant heme peroxidase family profile. 25 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0958 Ssu-Chr7 20953185 20954005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0958 12 191 Peroxidase AT1G14550 64.088 1.05e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0958 K00430 - gmx:100786161 325.094