Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0957 ATGGCGTATAGAACTTCAATGGTGCTGTTAGGCACAATATGTGATGCACAATTGTCTTCTACGTTTTATGACGGTGCATGCCCCAATGCACTTAGCACCATAAGATCTGTGATTCGTAGTGCAGTATCTAAGGAGCGCCGCATGGCTGCGTCTCTTATTCGCCTTCATTTTCACGACTGCTTTGTTCAGGGTTGTGATGGATCAATTTTGCTTGATGATAGCTCCTCTATCGAGAGCGAAAAGAGTGCACTTCAGAATGCTAACTCAATAAGGGGATATAACATCATCGATCAAGCAAAAGCTGAGGTGGAGAAAGTATGCCCCGGAGTGGTGTCATGTGCTGACATTGTAGCAGTAGCAGCACGTGATGCCTCATTTGCTGTGGGTGGTCCATCATGGACTGTGAAGCTTGGACGAAGAGATTCTACCACCGCAAGCAAAGTCTGGCTACTAGTGACCTTCCACTATTTACAGACGATCTTGACACTCTTATCTCTAAATTCAGTAATAAGGGGCTAA 519 0.4528 MAYRTSMVLLGTICDAQLSSTFYDGACPNALSTIRSVIRSAVSKERRMAASLIRLHFHDCFVQGCDGSILLDDSSSIESEKSALQNANSIRGYNIIDQAKAEVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKVWLLVTFHYLQTILTLLSLNSVIRG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0957 172 PANTHER PEROXIDASE 72-RELATED 7 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PANTHER PEROXIDASE 7 148 - -
Ssu7g0957 172 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 Pfam Peroxidase 35 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 ProSiteProfiles Plant heme peroxidase family profile. 17 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
Ssu7g0957 172 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0957 172 Gene3D - 18 155 - -
Ssu7g0957 172 SUPERFAMILY Heme-dependent peroxidases 17 148 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0957 Ssu-Chr7 20943700 20944491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0957 6 147 Peroxidase AT1G14550 69.014 1.59e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0957 K00430 - gmx:100786161 258.07