Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0931 ATGGGCTGTGTTCAGGCTAAGCCATTGGATTTGGAAGCTTCAGACTACAGGAGCCTGGAGAGGTTGAAGTTGGATAATGGGTATGTCGCAAGTGCTGACTTTGTTGCTCATAGAAGATCCACCGGTCAAAGACATGACCCTAAGGAGTATGGTAGGCCGCATCAGAGAGAACAACAACCCAGAAGGCATGATAAACGTGAGTCTGGTATTGGCAATGCCGCAGGGCGTAACAAGGGCAAGTTGGTTGGTAGAGAGGGGAGGAGAGTCGCACGTGATGATAAGAAGTTGGCCAACAAGTGCTGTTTTGAGGATGAGATGATGGTTGGTGGGTGGCCAAGGTGGTTGGTTGATAATGTTCCTGCACAGGTGTTGGCTGGCCTGGTTCCCAAGAGTGCTGAATCGTACAAAATGATTGATAAGGTAGGACAAGGAACCTATAGCAATGTTTATAAAGCTCTGGATCGAGACACGGGAGAAATTGTGGCCCTGAAGAAGGTTCGCTTCAATACATCAGAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATTATGATAGTACAGAGATTGGATCATCCCAATGTGGTAAAACTTAAGGGATTAGCCACTTCAAGACTGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACAGATCTGGCAAGAATTATTGCTCGTCCCGAAGAGAGACTAACCGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTTTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTAAGATTGCAGATTTTGGACTTGCCAATTGTTATGGTCCAGATCGGCACCAGCCTCTCACAAGCCGGGTTGTGACACTATGGTATAGAGCTCCTGAGTTGTTGTTAGGTGACACAAATTATGGAGTTGGTGTTGATCTATGGAGTGCTGGATGTCTCCTGGCAGAAATGTTTAAAGGAGTTCCAATAATGCCTGGCAGAACTGAGGTTGAGCAACTTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTACAACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCAGGGATCTCCCTCCATCTTCTTTAGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGCATTCCGTGGCAGTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGTCTGCCTGTTATCTTCAGCGAGGATGATGAGCTTGTTCAAGCCAATGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATATCTGGAGCGTCATAAGAATTCAGCATCTAAGAGACCAATAGAACATACTGTATCTTCTAAAGAGGAATTGATAAGGAATGCTAAACCCGAAACTTATGTTCCAACTGAAGACATGGATAGCACAAGTAGCACCCCATCTAGTGTAAACCCAGGTGGGGCTAAGGACCAATCACCTTTCTTTCTATCTCCATTTCGAGCTTCTGATCAAAAGCTGTCTCCCGAAATCCATTACCATGTTAATGTTGGTGGAAAAAACATCAAGAACCTTCCTCCATTACCCAAGTCAAAACCAAATGCTACCAAGAAAGATGACAGCAGATACAGACAAGGCCAGGTTTTCAGGTCAGCTTCCACCAGAgaatttagatacttaaaaaaagAGGAACGTTTGCTTTTGGAAATGGATGATTAG 1788 0.4306 MGCVQAKPLDLEASDYRSLERLKLDNGYVASADFVAHRRSTGQRHDPKEYGRPHQREQQPRRHDKRESGIGNAAGRNKGKLVGREGRRVARDDKKLANKCCFEDEMMVGGWPRWLVDNVPAQVLAGLVPKSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREIMIVQRLDHPNVVKLKGLATSRLQYSIYLVFDFMQTDLARIIARPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANCYGPDRHQPLTSRVVTLWYRAPELLLGDTNYGVGVDLWSAGCLLAEMFKGVPIMPGRTEVEQLHKIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLVETFRDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPVIFSEDDELVQANEQIKYMNSKIRRSRTYLERHKNSASKRPIEHTVSSKEELIRNAKPETYVPTEDMDSTSSTPSSVNPGGAKDQSPFFLSPFRASDQKLSPEIHYHVNVGGKNIKNLPPLPKSKPNATKKDDSRYRQGQVFRSASTREFRYLKKEERLLLEMDD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0931 595 ProSiteProfiles Protein kinase domain profile. 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0931 595 MobiDBLite consensus disorder prediction 35 87 - -
Ssu7g0931 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Ssu7g0931 595 PANTHER CYCLIN-DEPENDENT KINASE 1 560 - -
Ssu7g0931 595 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Ssu7g0931 595 MobiDBLite consensus disorder prediction 494 512 - -
Ssu7g0931 595 Gene3D Phosphorylase Kinase; domain 1 127 217 - -
Ssu7g0931 595 MobiDBLite consensus disorder prediction 461 486 - -
Ssu7g0931 595 MobiDBLite consensus disorder prediction 541 571 - -
Ssu7g0931 595 MobiDBLite consensus disorder prediction 38 71 - -
Ssu7g0931 595 Pfam Protein kinase domain 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0931 595 MobiDBLite consensus disorder prediction 461 519 - -
Ssu7g0931 595 PANTHER CELL DIVISION PROTEIN KINASE 1 560 - -
Ssu7g0931 595 SUPERFAMILY Protein kinase-like (PK-like) 130 421 IPR011009 -
Ssu7g0931 595 Gene3D Transferase(Phosphotransferase) domain 1 218 470 - -
Ssu7g0931 595 SMART serkin_6 135 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0931 Ssu-Chr7 20332558 20337053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0931 130 478 Core Cell Cycle Gene Families AT5G10270 42.507 5.89e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ssu7g0931 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0931 K08819 - gmx:100776854 971.844