Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0928 ATGGCTGGAGCTAGTTGCAGTAGCACTCCCTTGtgctcttttttctttatttcttggtTACTTTTTGCTTCCTGCACCCATGCCTCCTCCGAGGCACTTGCAATGCCTCCAATTGTGGATGGACTGTCATGGAATTACTATTGGTTGAGCTGTCCCAGGCTTGAAGGTATAGTCAGAAGGCATCTCCAGAAGGTGTTCAAGCAGGACAGTGGTCAAGCCCCTGCCTTACTCAGGATCTTCTTCCATGACTGCTTCGTTCAGggTTGCGATGGGTCGATATTGTTGGATGGAACTCCAAATGAAAGGGATCAACCAGCAAACATAGGGATAAGGCCAGAGGCCTTGCAGACCATTGAAGACCTTCGATCTCTTGTTCACAGGCAGTGTGGAAAGGTTGTCTCTTGCGCTGACCTCGTTGTTCTGGCGGCACGCGAAGCTGTTTCTCTgTCAGGGGGCCCAAAATTTGCCGTGCCACTGGGAAGAAAGGACGGCCTAACCTTGAGCATAAACGGCACAAACAACCTTCCGGCGCCGTTTTTCAGAACCGGCGAACTCCTGGACAGATTCGCGGCCAGAAACTTCGACGCCACGGACGTGGTCGCACTCTCCGGCGCGCACACCTTCGGGCGGGCCCACTGCGCCACGTTCTTTAACCGTATCAACCAAACGGACCCGCCCATCGACCCGTCCTTCGCCGACAACCTCAGCAGCACCTGTCCCAGCGCGGATTCCGGCAACACCGCTGTGCTGGACGTGAGAACCCCCGAAGTGTTCGACAACATGTACTACGTCAACCTCGCGAACCGCCAGGGGCTGTTTACCTCGGACCAGGACCTGTTCAGTGACGCCAGGACGAAGGGGATTGTGAACTCCTTTGCCTCCAATCAGAGACTGTTCTTTGCGAGGTTTGCCGATGCGGTTGTCAAGTTGAGTCAGTTGGATGTGTTGACCGGGAAACAGGGACAGGTTCGTGCCAAATGCTCCGTCACCAACAGGAAGAAGGGGCCTTTGGTGGTGACCGAGGTCGTGGAAGAGGTCGTGGATTTAAGTGGTCTGCTCTGA 1062 0.5367 MAGASCSSTPLCSFFFISWLLFASCTHASSEALAMPPIVDGLSWNYYWLSCPRLEGIVRRHLQKVFKQDSGQAPALLRIFFHDCFVQGCDGSILLDGTPNERDQPANIGIRPEALQTIEDLRSLVHRQCGKVVSCADLVVLAAREAVSLSGGPKFAVPLGRKDGLTLSINGTNNLPAPFFRTGELLDRFAARNFDATDVVALSGAHTFGRAHCATFFNRINQTDPPIDPSFADNLSSTCPSADSGNTAVLDVRTPEVFDNMYYVNLANRQGLFTSDQDLFSDARTKGIVNSFASNQRLFFARFADAVVKLSQLDVLTGKQGQVRAKCSVTNRKKGPLVVTEVVEEVVDLSGLL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0928 353 PANTHER PEROXIDASE 25-RELATED 26 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 ProSiteProfiles Plant heme peroxidase family profile. 41 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 Gene3D - 45 328 - -
Ssu7g0928 353 Pfam Peroxidase 58 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PANTHER PEROXIDASE 26 335 - -
Ssu7g0928 353 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Ssu7g0928 353 SUPERFAMILY Heme-dependent peroxidases 36 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 CDD secretory_peroxidase 41 330 IPR033905 GO:0004601|GO:0042744
Ssu7g0928 353 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu7g0928 353 Gene3D Peroxidase, domain 2 177 311 - -
Ssu7g0928 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0928 Ssu-Chr7 20294020 20297259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0928 37 349 Peroxidase AT1G71695 53.750 8.47e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0928 K00430 - gmx:100804126 561.607