Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0896 ATGCCCTtccccattctctttctctttctcctacCTTCACTCTTCTGGCTTTCACATTCAGCCACAATTCTAGTAGACGGATCTTCAGAGTGGAAGAACCCCACTGTTTCCATCGGTGATTCCATCATTTTCAAGCACAAGCAACACTACAACCTCTACATTTTCAAGAACCAGAAAGCCTTCAACCTCTGCAATATCACTCAAGCCACTCTTCTCACCAACCCCTACACGTGGCATCCATCTCGGCCTGGTTTCTTCTACTTTACCTTCCACAATGGCTCAGTGAAAGCATGCCAAGGTTCTCAAAAGCTAGCCATAAAGGTTACTTCTTCAGCAATGGCTCCAGAACTTTCTCCAATGGCAACACCAGCTCCTTCTTCTGGCGGAGAGGTGCCATCTTCGCCTTCGTTTCCATGGCCTTTTCGTCCTCACCAAGCAGCTTCTTCACCTGGCCCAGCACCACAAGCACAAGCGAGTTCACCGGTGACAGTTCCATTGGTGCCAGATAAAGGTGGTGGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTGCCTACTGGGGAAGTTGACTCTGCTACCATACGACCCTTACCCACCTCTGGCCATCAAGGACAGGTGATGATTGGGTCGTTTGGATTTCATATTGCTGTGCACTCCATGGCTTTACTGCTGCTGtga 681 0.4743 MPFPILFLFLLPSLFWLSHSATILVDGSSEWKNPTVSIGDSIIFKHKQHYNLYIFKNQKAFNLCNITQATLLTNPYTWHPSRPGFFYFTFHNGSVKACQGSQKLAIKVTSSAMAPELSPMATPAPSSGGEVPSSPSFPWPFRPHQAASSPGPAPQAQASSPVTVPLVPDKGGGMPFINSNPAVPLPTGEVDSATIRPLPTSGHQGQVMIGSFGFHIAVHSMALLLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0896 226 MobiDBLite consensus disorder prediction 117 171 - -
Ssu7g0896 226 PANTHER OS04G0422700 PROTEIN 3 225 - -
Ssu7g0896 226 Gene3D - 19 111 IPR008972 -
Ssu7g0896 226 PANTHER OS04G0422700 PROTEIN 3 225 - -
Ssu7g0896 226 SUPERFAMILY Cupredoxins 20 109 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0896 Ssu-Chr7 18532472 18534219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0896 5 160 Phytocyanin Superfamily AT4G28365 23.529 1.97e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0896 - - gmx:100808387 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0896 7 18532472 18534219 Ssu7g0896 7 18532472 18534219 PCT