Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0895 ATGGCGTCGTCGAAGCTGATGGCGTGTTCGAATTCGAGAAAATCGGGGACCTCGTCTTCCCCTTCTCCCAACCCCCAATTCACCACCACCAACTTCATGCCCATCCCCGACGCCGCCGCTCCCAAAACCGTGGACGACGTGTGGCGGGAGATCGTGGCCGGCGACCGCCGCGAGTGCAAGGAGGAGGCCCCCGACGACGAGATGATGACCCTCGAGGACTTCCTCGCGAAGGCCGACGCCGTCGACGAGCCCGACcccgacgacgacgacgacgacgacatCAAGATGCCAATGCCCCTCACCGAGAGGCTCGGCAGCGGCGTCTTCGCCTTCGACCCCGTCCCCGCCACGCCGTTTCACGACGCCGCGGAAGGGCCCGTCGTAGGGTTCGGGAACGGCGTGGAGGTGGTCGAAGGGAGACGGGGGAAGAGGGCGCGTCCCGTTTTGGAGCAGTTGGATAAGGCCGCGCAACAGAGGCAGAGGAGGATGATCAAAAACAGGGAATCCGCTGCTCGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAACTGGAGTCCCTGGCGGTGAGACTAGAGGAGGAAAATGACAAGCTCTTGAAGGAAAAGGTGCTTTCATGTGTTCTTAATTTTTGTCCCGACAATGCTTTCATAAGTCCTGCTACTCGGCAATTTcgtttgttgttcttttttgtAATCATCGCAGGAGACAATAAGTTTTGCTTTGTGTTGAACTTGAAAGTTGATACCCTTCCAGTGTTGATTTTTCATTGA 771 0.5435 MASSKLMACSNSRKSGTSSSPSPNPQFTTTNFMPIPDAAAPKTVDDVWREIVAGDRRECKEEAPDDEMMTLEDFLAKADAVDEPDPDDDDDDDIKMPMPLTERLGSGVFAFDPVPATPFHDAAEGPVVGFGNGVEVVEGRRGKRARPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENDKLLKEKVLSCVLNFCPDNAFISPATRQFRLLFFFVIIAGDNKFCFVLNLKVDTLPVLIFH 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0895 256 MobiDBLite consensus disorder prediction 1 41 - -
Ssu7g0895 256 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 161 176 IPR004827 GO:0003700|GO:0006355
Ssu7g0895 256 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 156 201 IPR004827 GO:0003700|GO:0006355
Ssu7g0895 256 CDD bZIP_plant_BZIP46 158 206 - -
Ssu7g0895 256 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 37 202 - -
Ssu7g0895 256 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 202 IPR043452 GO:0003700|GO:0045893
Ssu7g0895 256 Coils Coil 177 201 - -
Ssu7g0895 256 Pfam bZIP transcription factor 156 201 IPR004827 GO:0003700|GO:0006355
Ssu7g0895 256 Gene3D - 156 206 - -
Ssu7g0895 256 MobiDBLite consensus disorder prediction 1 33 - -
Ssu7g0895 256 SUPERFAMILY Leucine zipper domain 158 201 IPR046347 GO:0003700|GO:0006355
Ssu7g0895 256 SMART brlzneu 154 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0895 Ssu-Chr7 18525348 18526214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0895 19 201 bZIP Transcription Factor Family AT5G44080 50.769 1.74e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu7g0895 bZIP_1 3.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0895 K14432 - gmx:100808917 253.832