Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0872 ATGGATTTGGTCGAAGGCGTGGGAGAGAGTTCCTCGCCCCCGCGCACCTTCAGCGGCTACAGCAACTACGACGTCAGGAGCGACGTCTACAACCGCTTAGTTGAAACCGGCCACGACCAAGCCGTTTCCAACCCCGAGTTCCGCGAACAGTTGGAGGCTCACTTCAATCGCTTGCCTCCGAGTTATGGACTCGACGTGAATATCGATAGAGCTGAAGATGTTCTGTTGCATCAAACCCTTCTTGCTCTGGCAAGGGACCCTGACAAGCGCCCTGTCTACCATATACGCTTCTTGGAGAATATCTCAACTAGAACAGATGGTGAAGatcaacaaattttaagtaCTCATTATAGCCCAGGGTCATCTTCCCATGCAACAAATGGGGGAGCTGTACCATCTGGTAAAAGGTATGCCATCCAGTGA 423 0.5035 MDLVEGVGESSSPPRTFSGYSNYDVRSDVYNRLVETGHDQAVSNPEFREQLEAHFNRLPPSYGLDVNIDRAEDVLLHQTLLALARDPDKRPVYHIRFLENISTRTDGEDQQILSTHYSPGSSSHATNGGAVPSGKRYAIQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0872 140 MobiDBLite consensus disorder prediction 115 129 - -
Ssu7g0872 140 PANTHER SERINE-THREONINE PROTEIN KINASE 19 99 - -
Ssu7g0872 140 MobiDBLite consensus disorder prediction 115 140 - -
Ssu7g0872 140 PANTHER ATP BINDING PROTEIN 19 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0872 Ssu-Chr7 17952875 17954921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0872 22 96 MAP Kinase Kinase Kinase AT2G17700 53.333 2.87e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0872 - - gmx:100782737 255.758