Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0870 ATGCTTATGATAGCATATTTGTCAacagaaacaaataaaagtttgGAGTGTTGGACCTATATTCATGTTACTGGGAGTGAGTATAAGTTGCAATTTTCAACTAGGATCATCCACTTTGTGTCTGACCCAGCTATGATGCTGTACATCCTTCAGGGACTGCGACCAGAACTTCCAAAGCATGGGCACCCTAAACTGTTAGATTTGATGCAAAGATGTTGGGAAGCAATTCCAAGCAACCGTCCATCCTTTAATGAGATAACTGTTGAACTTGAAAATCTTTTGCTAGAAATGGAGAATGATTCAGAAGCGAATGGTGCTTGA 321 0.3801 MLMIAYLSTETNKSLECWTYIHVTGSEYKLQFSTRIIHFVSDPAMMLYILQGLRPELPKHGHPKLLDLMQRCWEAIPSNRPSFNEITVELENLLLEMENDSEANGA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0870 106 Pfam Protein tyrosine and serine/threonine kinase 41 90 IPR001245 GO:0004672|GO:0006468
Ssu7g0870 106 Gene3D Transferase(Phosphotransferase) domain 1 15 104 - -
Ssu7g0870 106 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 47 100 - -
Ssu7g0870 106 SUPERFAMILY Protein kinase-like (PK-like) 40 97 IPR011009 -
Ssu7g0870 106 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 47 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0870 Ssu-Chr7 17940319 17940972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0870 44 100 MAP Kinase Kinase Kinase AT4G35780 42.105 1.22e-11 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Ssu7g0870 PK_Tyr_Ser-Thr 3.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0870 - - gmx:100797987 102.064