Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0864 ATGCCTTATCCCTCTCTTCTCCCACTCTTATTATCCTTCCTTCTCTTCACCATCCCCTCCCTCTCCCTCCCTTCCGACAACCTGACCCTCTACGGTGACGCCTTCTTCTCCCAGGGCGCCCTGGCCCTGACCACCCGGCACCCCTCCTCCGTGGGCAGAGCCTTCTACGTCTACCCCGTCCGCTTCCTGGACCCCCGCACCAACTCCACCGCCTCCTTCTCCTCCCGCTTCTCCTTCTCCATCCTCCCCTCCCGCCCCGCCTCCGACGGCCTCGCCTTCCTCATCGCCGACTCCCCCGACTCCCCCGCCGCCGCCCACATGGGCCTCCCCTCCCCCCAACACCCCTTCTTCGCCGTCGAATTCGACCCCCGCCTCGCCGACATCAACGGCAACCACGTCGCCGTCGACCTCAAGAGCGGGAGGCACGTCACCGCGTGGGTCGAGTACAGGCACGCAGCGAAAACGGTGCGCGTGTGGGTGGGTTACTCCTCGACCAGACCTCCCACTCCGATTCTTGCTTCGCAGATAGACCTTTCCGAGAGGGTCAAGGACTTCATGCACGTTGGTTTCACTGCCTCCAACGGGGAGGAGGGCTCCAGCGTGCACCTTGTTCATCACTGGCAGTTCAAGACTTTTGCTTACGACGACTCTCGCTCCACGGATATGCTCCAAGAAGGAGACTGTTTCTTGTGTTACGAGGGGGATTCCATGTCGGACAATGAGAGGAGGAAAAAGATTGGGGAGATGGCTCTTGGCTTGGGAGGGTTGACGGCGTTCGCGGTGTCAGGTTTCGCGGCCGTGGTTGTGGTGTGTGTTTTCTTGACAAAGAAGAAAGGTGGTGGTGGGCAAAGTTGTAGGTTTCAGACGAGTAGAGTGCCAACTAGGTTGTCACTCTCGGAGATTAAGTCTGCTACCATGGGGTTTAATCGAGAGAGGCTTGTTGGGGAGGGTGCGTCTGCGAAGGTTTATAGAGGGTATCTTCCCTTTGGAGGGGATGTGGCAGTCAAGAGGTTTGAGAGGGATAATGGTCTGGACTGCTTGCACAACCCTTTTGCCACGGAGTTTGCCACCATGGTGGGTTACTTGCGGCACAAGAATTTGGTTCAGCTTAAGGGGTGGTGCTGTGAGGGGAACGAGTTGGTCTTGGTTTACGAGTTTTTGCCCAACGGGAGCCTCAATAAGGTTCTGCACAGAAACTTCAATTCTTCCGTTGTTCTTTCGTGGAGGCAAAGGGTCAGTATTGTTCTCGGGGTTGCTTCTGCTCTCACCTATCTTCATGAGGAGTGTGAGAGGCAGATCATTCATAGGGATAGTGCGGTTGGGGATTGGCTCAGCACTGATGAGGCTCCTTATTTGACCCCTAGAAGCCAGTTTTACTAG 1380 0.5674 MPYPSLLPLLLSFLLFTIPSLSLPSDNLTLYGDAFFSQGALALTTRHPSSVGRAFYVYPVRFLDPRTNSTASFSSRFSFSILPSRPASDGLAFLIADSPDSPAAAHMGLPSPQHPFFAVEFDPRLADINGNHVAVDLKSGRHVTAWVEYRHAAKTVRVWVGYSSTRPPTPILASQIDLSERVKDFMHVGFTASNGEEGSSVHLVHHWQFKTFAYDDSRSTDMLQEGDCFLCYEGDSMSDNERRKKIGEMALGLGGLTAFAVSGFAAVVVVCVFLTKKKGGGGQSCRFQTSRVPTRLSLSEIKSATMGFNRERLVGEGASAKVYRGYLPFGGDVAVKRFERDNGLDCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGNELVLVYEFLPNGSLNKVLHRNFNSSVVLSWRQRVSIVLGVASALTYLHEECERQIIHRDSAVGDWLSTDEAPYLTPRSQFY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0864 459 Gene3D Phosphorylase Kinase; domain 1 275 386 - -
Ssu7g0864 459 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 212 IPR013320 -
Ssu7g0864 459 CDD lectin_legume_LecRK_Arcelin_ConA 17 212 IPR001220 GO:0030246
Ssu7g0864 459 SUPERFAMILY Protein kinase-like (PK-like) 285 437 IPR011009 -
Ssu7g0864 459 PANTHER - 23 437 - -
Ssu7g0864 459 Pfam Legume lectin domain 16 139 IPR001220 GO:0030246
Ssu7g0864 459 ProSiteProfiles Protein kinase domain profile. 308 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0864 459 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Ssu7g0864 459 Pfam Protein tyrosine and serine/threonine kinase 311 439 IPR001245 GO:0004672|GO:0006468
Ssu7g0864 459 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 23 437 - -
Ssu7g0864 459 Gene3D Transferase(Phosphotransferase) domain 1 387 447 - -
Ssu7g0864 459 Gene3D - 14 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0864 Ssu-Chr7 17818958 17820853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0864 10 437 Receptor kinase-like Gene Family AT5G42120 47.541 2.59e-139 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu7g0864 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0864 - - gmx:100783805 627.861