Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0862 ATGGCCAGCCTTCCAGATTCGAATGTTCACGGCaaagagaagatgaaagaaGCGCAAGAATTACAAGATGAAGCAAGCTTCTCGTATGCTATGCAGCTTGGCAACTCCATTGTGCTTTCCATGGCACTGCAATCGATGACGGAGCTGGGCGTATTTGACGTGTTGCAAAAAGCTGGTGAAGGTGCTAAGCTCTCAGCCAAGGAGATAGCATCCCAGCTTTCGTGCAACAACCCAGAAGCACCCTCAATGCTAGATCGCATCCTCGCCCTTCTTGCATCTCACAACATCCTTAACTGTTCCGTCGTTTCCGACAACCAAAACCTCGGATCCTTGCGCAGACTCTACACCATCACCCCTGTCGCCACATTCTTTGCTCGCAATTCTGATGGGGTTTCATTGGGACCCTTGTTGGCCTTGCACCAAGATAAGATCTTCCTACGCAGCTGGTCCGAGCTGAAAGATGCAATTCGAGAAGGAGGTGTTCCGTTCAACAGGGTTTATGGCGCTCACGCTTTTGAGTATCCAAGCTTGGACTCGAGGTTCAATCAAGTCTTTAATACGGCAATGATCAATCACACTCCCTTAGTGATGAAGAAGGTTCTGGAGTGCTACAAAGGTTTTGAGGACATAAAAAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAATACCCTCATATCCAGGGTATCAATTTCGACTTGCCTCATGTCATAGAGCATGCTCCTTCCTATCCTGGTGTGGAACATGTTGGCGGAGATATGTTTGAAAGTGTGCCTAAAGGAGACGCCATCCTTATGAAGGTAAGTGGAAGCGTGTGCTTGTTTTGCAGTTAA 855 0.469 MASLPDSNVHGKEKMKEAQELQDEASFSYAMQLGNSIVLSMALQSMTELGVFDVLQKAGEGAKLSAKEIASQLSCNNPEAPSMLDRILALLASHNILNCSVVSDNQNLGSLRRLYTITPVATFFARNSDGVSLGPLLALHQDKIFLRSWSELKDAIREGGVPFNRVYGAHAFEYPSLDSRFNQVFNTAMINHTPLVMKKVLECYKGFEDIKRLVDVGGGLGININLITSKYPHIQGINFDLPHVIEHAPSYPGVEHVGGDMFESVPKGDAILMKVSGSVCLFCS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0862 284 Pfam O-methyltransferase domain 149 274 IPR001077 GO:0008171
Ssu7g0862 284 PANTHER O-METHYLTRANSFERASE 6 274 IPR016461 GO:0008168
Ssu7g0862 284 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 284 IPR016461 GO:0008168
Ssu7g0862 284 Pfam Dimerisation domain 41 92 IPR012967 GO:0046983
Ssu7g0862 284 SUPERFAMILY "Winged helix" DNA-binding domain 23 127 IPR036390 -
Ssu7g0862 284 Gene3D - 7 124 IPR036388 -
Ssu7g0862 284 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 274 - -
Ssu7g0862 284 Gene3D Vaccinia Virus protein VP39 125 277 IPR029063 -
Ssu7g0862 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 274 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0862 Ssu-Chr7 17752673 17753982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0862 14 274 Monolignol Biosynthesis Gene Families AT5G54160 53.612 6.68e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0862 K13066 - gmx:100803633 442.965