Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0849 ATGGCAAATGCTGCTTCCTCCTTTCCTTCTTGTTGGGTCATTCTTGCTCTGGGCCTGTGTTGTTTTAGTAGCTGCACTTCGGGCCAGATTGGTTTGGGCTCGACGTTGTTGGCTAGCAAGGCCCAAACATGGGTTTCTGACAATGGCACATTTGCTTTGGGGTTCACTCCAGCGGAGACCGATAATCGATTGTTTGTGATTGGCATTTGGTTTGCACAGCTTCCAGGAGATCGAACTTTAGTTTGGTCACCCAACAGAGACACTCCTGTATCCCAAGATGCAATCCTGGAGCTTGACACCACTGGAAACCTTGTTCTCATGGATGGACACATCACAGTGTGGACCTCAAACACCTCAGCCGCTGATGTACAAGCAGCAGTCATGGCAGAATCTGGCAACTTCATTCTCCACAACACCAACAACCACTCTGTGTGGCAGAGTTTTTCTCAACCTTCTGACACTCTCCTCCCCAACCAGCTTCTAACAGTGTCTTCAGAACTAACATCATCAAAGTCCTCCTCTCATGGTGGCTACTATGCTCTCAAAATGCTTCAGCAGCCTACTTCCTTAAGCCTTGCTCTCACTTACAATCTCCCTGAGACTTACCAAGCCTCAGATGAATCATACACCAACTATTCCTATTGGCAAGGCCCTGATATCTCCAATGTGACTGGGGAAGTTATAGCGGTTTTAGACCAAGCTGGGAGCTTTGGAATTGTGTATGGAGACTCATCTGATGGAGCAGTTTATGTGTACAAGAATGATGGTGATGATGCAGGCTTGTCTTCTGCAGTTCATCAATCTGCACCATTGACTGTTCTTAGGAGACTAACACTGGAAAAGAATGGCAATCTGCGGTTGTATCGATGGGACGAGGTGAATGGTTCAAGACAGTGGGTGCCACAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAGTTTGTGGCAATGGGGTTTGTAACTTGGATAGAAGTAAGACAAAAGCCATTTGCACTTGCTTGCCAGGAACTTCTGAAGTTGGCAAGGATGGCCAGTGCTATGAGAATTCATCTCTTGTTGGAAAATGCACTGGCCAGCATGAAAACCTGACATCCCAGTTTAGGATTTCAATGGTGCAACAAACCAACTattatttttctgaattttcAGTAATAGCTAACTACAGTGACATTTCTAATGTCTCAAAATGTGGGGATGCTTGCTTGTTAGATTGTGATTGTGTGGCTTCTGTTTATGGGCTAAATGAGGAGAGACCAtattgttggttgttgaggAGCTTAAGTTTTGGTGGTTTTGAGGATACTAGCTCAACTTTGTTTGTGAAGGTCAGAGCAAATGGCTCATGGACACCAGAAGGCCAAGCAGGAGTGCCTAATAGCTCTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACTGTTCTGAGCATGGTTGTTCTCATTGTTTTGCTATGTTTATTGTTGTATTACAGTGTTCACAGAAAAAGAACTTTGAAAAGGGAGATCGAAAGTTCCTTGATCTTATCAGGTGCTCCAATGAATTTTACCTACCGCGATTTGCAAATTAGGACATGCAACTTTTCCCAGCTTCTAGGAACAGGTGGATTTGGGAGTGTGTATAAGGGAAGCCTGGGAGATGGTACCCTAGTGGCAGTGAAGAAACTTGACAGGATTTTGCCTCATGGAGAGAAGGAATTCATCACTGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGCTCAGAGGGATCACAGAGGCTCCTGGTTTATGAGTACATGAAAAATGGATCCTTGGATAAATGGATCTTCCACTCATATCAAGGGCGAGATAGATTGCTAGATTGGACAACTCGTCTCAATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGTAGGAATCGGATAATACATTGTGACATCAAACCCGAAAATATACTGTTAGACGAAAACTTTTGTCCTAAAGTATCGGATTTTGGACTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTAGTAACCATGGTCAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTTAAAGCCGATGTTTACAGCTATGGGATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTgctgaggacttcttctatccTGGTTGGGCTTACAAGGAGATGACAAATGGCCAAGGATCACTAATTAAAGTGGCAGATAGAAGATTAAATGGGGCAATTGATATAGAAGAGCTAATGAGAGCTCTGAAAGCAGCATTTTGGTGCATCCAAGATGAGGTTTCCATGCGACCAACAATGGGGGAAGTGGTAAGAATGCTGGAAGATACCATCGACATTAATATGCCACCAATGCCGCAAACAGTGCTAGAGTTAATTGAGGAAGGCTTAGACAATGTGTACAAAGCTATGAAAACAGAGTATAACCAGTTCAGCTCATTCGCAAATACCAGCCATCTTACGTCTCATGCCACATGTAGCAATTCCACAATGTCACCAAGATAG 2595 0.4328 MANAASSFPSCWVILALGLCCFSSCTSGQIGLGSTLLASKAQTWVSDNGTFALGFTPAETDNRLFVIGIWFAQLPGDRTLVWSPNRDTPVSQDAILELDTTGNLVLMDGHITVWTSNTSAADVQAAVMAESGNFILHNTNNHSVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQASDESYTNYSYWQGPDISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDGDDAGLSSAVHQSAPLTVLRRLTLEKNGNLRLYRWDEVNGSRQWVPQWAAVSNPCDIAGVCGNGVCNLDRSKTKAICTCLPGTSEVGKDGQCYENSSLVGKCTGQHENLTSQFRISMVQQTNYYFSEFSVIANYSDISNVSKCGDACLLDCDCVASVYGLNEERPYCWLLRSLSFGGFEDTSSTLFVKVRANGSWTPEGQAGVPNSSSDGMGSAKEKAVIIPTVLSMVVLIVLLCLLLYYSVHRKRTLKREIESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRILPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSQRLLVYEYMKNGSLDKWIFHSYQGRDRLLDWTTRLNIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFGAEDFFYPGWAYKEMTNGQGSLIKVADRRLNGAIDIEELMRALKAAFWCIQDEVSMRPTMGEVVRMLEDTIDINMPPMPQTVLELIEEGLDNVYKAMKTEYNQFSSFANTSHLTSHATCSNSTMSPR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0849 864 SUPERFAMILY Protein kinase-like (PK-like) 509 805 IPR011009 -
Ssu7g0849 864 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 13 864 - -
Ssu7g0849 864 ProSiteProfiles Protein kinase domain profile. 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0849 864 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 165 IPR036426 -
Ssu7g0849 864 SMART serkin_6 530 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0849 864 PIRSF SRK 2 857 IPR024171 GO:0004674
Ssu7g0849 864 Gene3D Phosphorylase Kinase; domain 1 494 605 - -
Ssu7g0849 864 SMART blect_4 35 151 IPR001480 -
Ssu7g0849 864 Gene3D Transferase(Phosphotransferase) domain 1 606 813 - -
Ssu7g0849 864 Pfam D-mannose binding lectin 79 166 IPR001480 -
Ssu7g0849 864 Pfam Protein kinase domain 533 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0849 864 CDD STKc_IRAK 536 805 - -
Ssu7g0849 864 PANTHER OS07G0415500 PROTEIN 13 864 - -
Ssu7g0849 864 ProSitePatterns Protein kinases ATP-binding region signature. 536 559 IPR017441 GO:0005524
Ssu7g0849 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Ssu7g0849 864 Gene3D - 29 150 IPR036426 -
Ssu7g0849 864 Pfam S-locus glycoprotein domain 266 337 IPR000858 GO:0048544
Ssu7g0849 864 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Ssu7g0849 864 CDD B_lectin 39 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0849 Ssu-Chr7 17110625 17117472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0849 484 814 Receptor kinase-like Gene Family AT5G20050 42.458 8.67e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu7g0849 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0849 - - gmx:100775424 1587.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0849 7 17110625 17117472 Ssu7g0849 7 17110625 17117472 ECH