Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0835 ATGTCCACAGAGCTAACGGGACATGTTGCTGATCCTTCTTTGAAGGGAAAGTCCATATTGGATTGGATAGCTCCAAAGCTTATGCAATCAGTTGTGCAAAAAGATAACAGCTCTGAACTAGCTTTTGCCGTTGATATTTGGAGTTTGGGCTGCACAATTATTGAAATGTTCACAGGGAAGCTTCCTTGGAGTGAGTATGAACAAGATACCCATAGTCCCAGCCAGAGAGTTATCCGAAAATAA 243 0.4198 MSTELTGHVADPSLKGKSILDWIAPKLMQSVVQKDNSSELAFAVDIWSLGCTIIEMFTGKLPWSEYEQDTHSPSQRVIRK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0835 80 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 68 - -
Ssu7g0835 80 Gene3D Transferase(Phosphotransferase) domain 1 2 80 - -
Ssu7g0835 80 SUPERFAMILY Protein kinase-like (PK-like) 21 68 IPR011009 -
Ssu7g0835 80 ProSiteProfiles Protein kinase domain profile. 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0835 80 Pfam Protein kinase domain 21 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu7g0835 80 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0835 Ssu-Chr7 16747936 16748657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0835 1 67 MAP Kinase Kinase Kinase AT5G66850 68.657 3.19e-26 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ssu7g0835 Pkinase 1.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0835 - - gmx:100816259 106.301